Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1902 ATGAATTCACTCAACAATATCACCCAAACCAAACCTTTGATAAAACTCATTTTAATCTCCTCTTCAATTTGTATCATATGTCTCTTGATGTCTACTATACTCTTGTCCACAACAAAGCTACAAGAAGAGTATTTCAAATCTTCACCACAAGATGTTTCTGCAGCCACAAATCTTGAGCATCTAGTGTTTGGACTTGGTTCAGGTAAGACTCTATGGTCTAAGAGGAAGGAATATGTAAGACTCTATTGGAAACCAAACAAAATGAGAGGATGTGTATTTGTTGGTACCCTCCCAAATGAAAACAACAATGATACATCAATTCCTCCACTATGTCTATCTTCAAACACTTCTAAATTTCATTACACTTGGGGGCCTAAGGGTCATTTATCAGCGAATCGAATGACACTTATTGTTAAGGACATAGTAGAAATGAATTATTCTAATGTTAGATGGTATGTGTTTGGAGATGATGATACTATTTTCTTCCCTGAGAATTTGGTGAAAACATTGTCAAAATATGATCATAGACTATGGTATTATATTGGTGCACATTCTGAGAGTTATCTTTCAAGCCAATATTTTAGTTTTGGAATGGCATTTGGTGGAGGTGGTTTTGCTATAAGTTCTTCTCTAGCAAAAGTGTTAGCCAAAGTGATTGATTCATGCATAGAAAGGTACCATTATCTCTATGGAAGTGATGCTAGGACATACTCTTGTATAACTGAACTTGGTGTTGGATTAACACAAGAACCTGGTTTTCATCAGGTTGATATGCGAGGTAATATCTTCGGCCTATTGGCCGCACATCCGGTAACTCCTTTATTGTCACTACATCATCCACATTTAATAGATCCAATGTTTCCTAACATGACAACTATGGACGCCCTACAACATTTGTTTGAAGCAGCAAATGTTGATTCCCAAAGGATCCTACAACAAACAATTTGCTATCACAAGAACTTTTCATGGACCATTTCAGTGTCATGGGGCTATGCTATTCAAGTATTCCCAACCCATATGACTTTGCCAGATGCTGTTAGAGTGCAATTAACAAACAAACATTGGAATAGAGGATCAAATGTTTTTGCAACTTTGTATAATTATAACACAAAACCACTTCACCATGACCCATGCAAAAGGTCCATTATTTTCTATCTAGACAATGTTTCTCATGATAAAGATGGCAGGATCATAAGCAATTATAGAAAATCATTTCGAAATTGCTCCTACAACATGGCATCATTGAATAAAGTGGAAATGATCAAAGTGTTCTCAAAGAAACTAGACCTTGAGATTAAACAGTTGCAGAGTCCAAGAAGACAGTGTTGTGATATATTGCCCCATAACACTGATGACCTAATGGAAGTTGCAATAAGAGAATGCAAAGATGAAGAATTGATTTTCATGCACTAA 1413 0.3602 MNSLNNITQTKPLIKLILISSSICIICLLMSTILLSTTKLQEEYFKSSPQDVSAATNLEHLVFGLGSGKTLWSKRKEYVRLYWKPNKMRGCVFVGTLPNENNNDTSIPPLCLSSNTSKFHYTWGPKGHLSANRMTLIVKDIVEMNYSNVRWYVFGDDDTIFFPENLVKTLSKYDHRLWYYIGAHSESYLSSQYFSFGMAFGGGGFAISSSLAKVLAKVIDSCIERYHYLYGSDARTYSCITELGVGLTQEPGFHQVDMRGNIFGLLAAHPVTPLLSLHHPHLIDPMFPNMTTMDALQHLFEAANVDSQRILQQTICYHKNFSWTISVSWGYAIQVFPTHMTLPDAVRVQLTNKHWNRGSNVFATLYNYNTKPLHHDPCKRSIIFYLDNVSHDKDGRIISNYRKSFRNCSYNMASLNKVEMIKVFSKKLDLEIKQLQSPRRQCCDILPHNTDDLMEVAIRECKDEELIFMH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1902 470 Gene3D - 48 310 - -
Lan6g1902 470 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 6 468 - -
Lan6g1902 470 Pfam Protein of unknown function, DUF604 192 443 IPR006740 -
Lan6g1902 470 PANTHER FRINGE-RELATED 6 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1902 Lan-Chr6 30047359 30049831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1902 13 435 Glycosyltransferase AT1G05280 48.956 5.25e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1902 - - gmx:100779943 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1902 6 30047359 30049831 Lan10g0044 10 254276 256001 LSH
Lan6g1902 6 30047359 30049831 Lan3g0025 3 224201 226119 LSH
Lan6g1902 6 30047359 30049831 Lan8g1528 8 22362746 22365233 PCT
Lan7g0437 7 3138794 3144390 Lan6g1902 6 30047359 30049831 PCT