Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0661 ATGGAGAAGGTAATGAGGTTGGCCTCACAAAAGGGTGTAGTGATTTTCACAAAGAGTTCTTGTTGTCTCTGCTATGCAGTGAACATTCTGTTTAAGGAAATTGGAGTGGTTCCTTCAGTGTATGAAATTGATAAAGACCCTGAAGGTAGAGAAATGGAGAAAGCTATAACAAGGTTGGGTTGCACTGCACCTGTTCCAGCAGTATTCATTGGAGGGAACCTAGTAGGCTCCACCAATGAAGTCATGTCCCTTCACCTTAGTGGTTCACTCATTCCATTGCTCCAACAATGTCAATCTTTATGTTAA 306 0.4183 MEKVMRLASQKGVVIFTKSSCCLCYAVNILFKEIGVVPSVYEIDKDPEGREMEKAITRLGCTAPVPAVFIGGNLVGSTNEVMSLHLSGSLIPLLQQCQSLC* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0661 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 100 IPR011905 -
Lan8g0661 101 CDD GRX_GRXh_1_2_like 13 93 - -
Lan8g0661 101 Pfam Glutaredoxin 13 75 IPR002109 -
Lan8g0661 101 Gene3D Glutaredoxin 1 100 - -
Lan8g0661 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lan8g0661 101 SUPERFAMILY Thioredoxin-like 1 98 IPR036249 -
Lan8g0661 101 PANTHER GLUTAREDOXIN 1 97 IPR011905 -
Lan8g0661 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0661 Lan-Chr8 8799245 8799550 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0661 1 100 Miscellaneous Gene Families AT4G15670 50.000 6.26e-36 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0661 K03676 - pop:18111301 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0661 8 8799245 8799550 Lan20g0223 20 1494256 1494904 LSH
Lan16g0878 16 15632309 15632611 Lan8g0661 8 8799245 8799550 PCT
Lan8g0661 8 8799245 8799550 Lan4g1052 4 15285032 15285589 PCT
Lan8g0661 8 8799245 8799550 Lan16g0880 16 15637858 15650307 PCT