Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0878 ATGGACAAGGTGATGAGGTTGGCCTCAGAAAAAGGTGTGGTGATTTTCACCAAGAGCTCTTGTTGTCTCTGCTATGCAGTGAACATTCTGTTTAAAGAACTTGGGGTAAGGCCTATGGTTCATGAAATTGACCAAGACCCTGAAGGCAGAGAAATGGAGAAAGCTCTATTGAGGTTAGGTTGTACTGCACCTGTTCCAGCTGTATTCATTGGAGGGAAGCTAAGAGGGTCAACCAATGAAATCATGTCCCTACACCTTAGTGGATCATTGACTCAATTGCTCAAACCATATCAATCTTTATGA 303 0.429 MDKVMRLASEKGVVIFTKSSCCLCYAVNILFKELGVRPMVHEIDQDPEGREMEKALLRLGCTAPVPAVFIGGKLRGSTNEIMSLHLSGSLTQLLKPYQSL* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0878 100 Gene3D Glutaredoxin 1 100 - -
Lan16g0878 100 CDD GRX_GRXh_1_2_like 13 93 - -
Lan16g0878 100 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
Lan16g0878 100 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Lan16g0878 100 Pfam Glutaredoxin 13 74 IPR002109 -
Lan16g0878 100 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 99 IPR011905 -
Lan16g0878 100 ProSiteProfiles Glutaredoxin domain profile. 1 100 - -
Lan16g0878 100 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0878 Lan-Chr16 15632309 15632611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0878 1 100 Miscellaneous Gene Families AT4G15660 48.000 7.02e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0878 K03676 - gmx:100499748 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0878 16 15632309 15632611 Lan8g0661 8 8799245 8799550 PCT
Lan16g0878 16 15632309 15632611 Lan20g0223 20 1494256 1494904 PCT