Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0362 ATGATGGCTAAAGAAGCTTCTTTGTGCTTCTTGTTTCTCTCTTTTCTCATCACCTTCAGTTCTGGAGCTCTTGTGGGACTTTCTTCAACATCTTCTGAAACAATATCATTCCTCCAACAAAGCAAGGTTTCTTCATTGCAAATTAGATTTTTTGTCACAGATCCTAGGATTTTAAGCACTTTCACCAACTACAACAACTTGTCAGTTGATTTCTACTTAAACAAAAGCATGGTTGAAACTTTCATTGCTTCAACACCATTTGGAGTTTCATGTCTAAAAACTCATGTAATGAACTTTCTTTCACAAATAAACATCAAAAGTGTTATTGTTTGCTGTGGTAGTGGTGAGTACTTAGCACAAAATAAGATACAGCCTTCACTTTTGTCTGCTCTTAAATCAGTCCATTCAGTTCTCAACAAGTTTCATGTAGGCAAGGAAGTAAAAGTCTCAGTAGCATTTCCACTATCATTCTTAGAGAAGTTAAATGCATCAAATGAAAGAGAACTTGTTAGGATTCTTTCATTTATAAAGGAAACAAAATCCTTTGTCTTGATAGAAGACAGCATTGATGGGGAATTAAGCATAGGGGAACACTTTGTTCAGTCTATTATCAAAAGAGTCACTCTTGCTGCTTCTATTCTTCCTTTAAAAGATGTTCCTGTGATTCTCACAATCAAGAGCAACGTTATCCCAAGTTCAAAAGAAATAGCTCAATTTAGTGAAAGGGTATCCAAATATCTAGAACCAAGACCTATGGTCACAAAGAGAATAGTTGCATTATATGCTGAAGTACACACAACAAAAGATTTTGCACAAAACCAGCTTAAAAGGGAAGAGTTAGAATTATTTCCTCACATGAGAAGAACTCTAGATGACACCACAACCAACCCACCAAACACAGTTTTCCCTACAAATCCTAAACCAGCTCCTACACCAGTTAATATACCACCAGATACACCAGCAATCATCACAGTCCCTTCTACAAATCCTGTAACAATTCCCCCTAACAATCCAGCTGCAATGCCAGTAACAGTTCCTAACACCACACCTGTGCCCTTAACTCCTACAAATTCAACCAATAATTCACCAGTTGTACCGGTCAGCAATCCACCTGCTACAACTCCAACAATAGTTCCAGGGGCAACACCAGTGCAACCAGTAACAAACCCTGCGGTATCTTATCCGCCGCCATCAGCAAGCGTTCCGGTCATAAACCATCAACCACCTCCTGCAAACACAAATATTCCTCCTGCCACTCAGGGGCAGAGTTGGTGTGTGGCAAAGATTGGAGCTACACAAAGTTCTCTTCAATCAGCACTGGACTATGCTTGTGGAAATGGTGCAGATTGTTCTCAGATACAGCAGGGTGGAAGTTGTTACAGTCCAGTTACTTTGCAGAATCATGCTTCTTATGCCTTCAACAGTTACTACCAAAAGCATCCAGCACCAACAAGCTGTGACTTTGGAGGGACTGCCACCTTAGTTAACACCAATCCAAGTTCGGGTTCTTGCATTCTCCCATCATCATCATCATCGACAACGACGCCAATTTCATCACCCCCAACAACAAATACACCATCAAATACAATACCACCACCAAGTACTATAACACCTCCATCATCAATTCCAACTACACCACCAGCAACACCCACACAATCGATCCCAACAGCACCACTAAAACCACCCTCATCTTCAGGAACTAGCACTTTCGGCTATGGTACTCCACCTTCAGTGTTAAATTCAAGCAACCCAATATCAGGTGCATTGTCAGGTTTCCCTCCTGCTGAAAATCCCGCGGCATCAACCTCTCATTCAGTTGGTCCTCTAAGACCTTATTTTAGCTCCATGGCTCTGATGATATCATTTGTCACTGCAAGAGTCACTATGCTACCATAG 1896 0.4098 MMAKEASLCFLFLSFLITFSSGALVGLSSTSSETISFLQQSKVSSLQIRFFVTDPRILSTFTNYNNLSVDFYLNKSMVETFIASTPFGVSCLKTHVMNFLSQINIKSVIVCCGSGEYLAQNKIQPSLLSALKSVHSVLNKFHVGKEVKVSVAFPLSFLEKLNASNERELVRILSFIKETKSFVLIEDSIDGELSIGEHFVQSIIKRVTLAASILPLKDVPVILTIKSNVIPSSKEIAQFSERVSKYLEPRPMVTKRIVALYAEVHTTKDFAQNQLKREELELFPHMRRTLDDTTTNPPNTVFPTNPKPAPTPVNIPPDTPAIITVPSTNPVTIPPNNPAAMPVTVPNTTPVPLTPTNSTNNSPVVPVSNPPATTPTIVPGATPVQPVTNPAVSYPPPSASVPVINHQPPPANTNIPPATQGQSWCVAKIGATQSSLQSALDYACGNGADCSQIQQGGSCYSPVTLQNHASYAFNSYYQKHPAPTSCDFGGTATLVNTNPSSGSCILPSSSSSTTTPISSPPTTNTPSNTIPPPSTITPPSSIPTTPPATPTQSIPTAPLKPPSSSGTSTFGYGTPPSVLNSSNPISGALSGFPPAENPAASTSHSVGPLRPYFSSMALMISFVTARVTMLP* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0362 631 MobiDBLite consensus disorder prediction 558 581 - -
Lan8g0362 631 SMART X8_cls 423 506 IPR012946 -
Lan8g0362 631 Gene3D - 418 518 - -
Lan8g0362 631 Pfam X8 domain 424 493 IPR012946 -
Lan8g0362 631 MobiDBLite consensus disorder prediction 503 581 - -
Lan8g0362 631 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 140 596 IPR044965 GO:0004553|GO:0005975
Lan8g0362 631 Gene3D Glycosidases 21 187 - -
Lan8g0362 631 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 140 596 - -
Lan8g0362 631 MobiDBLite consensus disorder prediction 289 312 - -
Lan8g0362 631 MobiDBLite consensus disorder prediction 525 557 - -
Lan8g0362 631 MobiDBLite consensus disorder prediction 503 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0362 Lan-Chr8 5749259 5752182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0362 386 509 Glycoside Hydrolase AT2G05790 43.411 9.50e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0362 - - gmx:100794910 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0362 8 5749259 5752182 Lan4g1325 4 22073879 22076597 LSH
Lan4g0919 4 11222242 11224862 Lan8g0362 8 5749259 5752182 PCT
Lan2g0254 2 2102529 2104921 Lan8g0362 8 5749259 5752182 PCT
Lan8g0362 8 5749259 5752182 Lan4g0919 4 11222242 11224862 PCT
Lan8g0362 8 5749259 5752182 Lan2g0254 2 2102529 2104921 PCT