Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g1325 ATGGCCAAGGAAGCTTCTTTGTGCTTCTTGTTTCTCTCTTTTCTCATCACCTCTAGTGCTGGAACTTTGGTGGGATTTTCCTCAAAATCTGCTGAAACAATATCATTTCTTCAGCAAAGCAAGGTTTCTCCATCTCAGATTAGAGTTTTAGTCACAGATTATAGGATTTTGAACACTTTTACCAACTACAACAAGGTCTCAGTTGATTTATACTTGAACAAAACCTTAGTTGAAAATTTCATTACTTCAAAACCATATGCAGTTTCATGGCTAAAAACTCATGTAGTGAACTTTATTTCAAAAGTAAACATCAAAAGCATCATTATTAAGTGTGGTAGTGAGTACTTGGCACAAAATGAGATAGAACCTTCACTTTTATCTGCTCTTAAATCAGTTCATTCAGTTCTCAACAAGCTTCATGTAGGCAAGGAAGTAAAAGTCTCAGTAGCATTTCCACTGTTATACTTAGAGAAGTTAAATACATCACATGAAAAGGAACATCTTGTTAAGATTCTTTCATTTATAAAGGAAACAAAATCCTCTGTCTTCATAGAAGACAGCATTGAAGGAGAACTAAGCATTGGGGAACATTTTGTTCAGTCTATTATCGAAAGAGCCGCTCTCGCTGCTTCTGTTCTTCCTTGCAAGGATGTTCCTATGGTTCTCACAATCAAGAGCACAGTTATCCCAAGTTCAAAAGAAGTATCTCAATTTAGTGAAAGGATATCCAAATATCTAGAACCAAGAACTCAGATCATAAAGAGAATAGTTGCACTATATGCAGAAGTACACACAATAGAAGATTTTGCACAGAAACAGCTCCAAAGGGAAGAGGAAGAATTATTTCCTCACATGAGAAGAACTTTAGATGACACCACAACAAACCCACCAAACACAATTTTCCCTAAAAATCCTACACCAGCTGCTACACCAACAATCACACCACCAGATACACCAGCAATAATCACAGTTCCTTCTACTACCAGTCCTGTTTCAATTTCCCCAACCAATCCAGCTGCAATACCAGTAACAGTTCCTAACACCACACCTGTGCCCTTAACTCCAACAAATCCTGCTGCTTCTGCAACTCCAATACCAGTGCAACCAGTCATAAACCCTGTGGCATCTTATCCTCCTCCACCAACAAGTGTTCCTGTCATAAACCCTCTGCCACCTCCTGCAAACACAAATGCTCCTTCTGTCATTCAGGGACAGAGTTGGTGTGTGGCAAAGAATGGAGCACCACAAAGTTCTCTTCAATCAGCACTGGACTATGCTTGTGGAAATGGTGCTGATTGTTCACAGTTACAGCAGGGTGGGAGTTGTTATAGTCCAGTTACTTTGCAGAACCATGCTTCTTATGCTTTCAATAGCTACTATCAAAAGAATCCAGCACCAACTAGCTGTGACTTTGGAGGGAGTGCCTCCTTAGTTAACACCAACCCAAGTTCGGGTTCTTGCATTTTCCCATCATCATCTTCATCAACAACAACAACGCCAATTTCGTCACCCCCAACAACAACTACACCATCAAATACTACACCACCACCAAGTCCTATAACTCCTCCATCATCAATTCCAACAACACCTACAACACCACCAGCAACACCTACATCATCAATTCCTACAGCACCAACGACACCCTCATCTTCAGGAACTGGCACTTTCGGCTATGGTACACCACCTTCAGTGTTAAATCCAAGCATCCCAACATCAGGCATAATGCCAGGTTTTCCCCCTGCTGAAAATTCCACATCGTTAACCTCACATTCAGTTAGTCTTCTGATACCTTCTTTTGGCTGCATGACTCTGATTATATCATTTGTCACTGCAAGACTCATTATGCAGCCATAG 1854 0.4061 MAKEASLCFLFLSFLITSSAGTLVGFSSKSAETISFLQQSKVSPSQIRVLVTDYRILNTFTNYNKVSVDLYLNKTLVENFITSKPYAVSWLKTHVVNFISKVNIKSIIIKCGSEYLAQNEIEPSLLSALKSVHSVLNKLHVGKEVKVSVAFPLLYLEKLNTSHEKEHLVKILSFIKETKSSVFIEDSIEGELSIGEHFVQSIIERAALAASVLPCKDVPMVLTIKSTVIPSSKEVSQFSERISKYLEPRTQIIKRIVALYAEVHTIEDFAQKQLQREEEELFPHMRRTLDDTTTNPPNTIFPKNPTPAATPTITPPDTPAIITVPSTTSPVSISPTNPAAIPVTVPNTTPVPLTPTNPAASATPIPVQPVINPVASYPPPPTSVPVINPLPPPANTNAPSVIQGQSWCVAKNGAPQSSLQSALDYACGNGADCSQLQQGGSCYSPVTLQNHASYAFNSYYQKNPAPTSCDFGGSASLVNTNPSSGSCIFPSSSSSTTTTPISSPPTTTTPSNTTPPPSPITPPSSIPTTPTTPPATPTSSIPTAPTTPSSSGTGTFGYGTPPSVLNPSIPTSGIMPGFPPAENSTSLTSHSVSLLIPSFGCMTLIISFVTARLIMQP* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g1325 617 MobiDBLite consensus disorder prediction 542 570 - -
Lan4g1325 617 MobiDBLite consensus disorder prediction 486 508 - -
Lan4g1325 617 MobiDBLite consensus disorder prediction 486 577 - -
Lan4g1325 617 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 140 583 IPR044965 GO:0004553|GO:0005975
Lan4g1325 617 Gene3D Glycosidases 21 186 - -
Lan4g1325 617 Gene3D - 384 485 - -
Lan4g1325 617 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 140 583 - -
Lan4g1325 617 MobiDBLite consensus disorder prediction 509 541 - -
Lan4g1325 617 SMART X8_cls 406 489 IPR012946 -
Lan4g1325 617 MobiDBLite consensus disorder prediction 288 309 - -
Lan4g1325 617 Pfam X8 domain 407 476 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g1325 Lan-Chr4 22073879 22076597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g1325 392 492 Glycoside Hydrolase AT2G05790 50.485 5.77e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g1325 - - gmx:100794910 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1325 4 22073879 22076597 Lan4g1325 4 22073879 22076597 ECH
Lan8g0362 8 5749259 5752182 Lan4g1325 4 22073879 22076597 LSH
Lan4g0919 4 11222242 11224862 Lan4g1325 4 22073879 22076597 PCT
Lan2g0254 2 2102529 2104921 Lan4g1325 4 22073879 22076597 PCT
Lan4g1325 4 22073879 22076597 Lan4g0919 4 11222242 11224862 PCT
Lan4g1325 4 22073879 22076597 Lan2g0254 2 2102529 2104921 PCT