Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0254 ATGGCAAAGGAAGCTTCTATGCACCTCTTGTTCTTCTCTTTTCTCATAATCTGCTGTTCTGGTACTCTGGTAGATTTGTCTGATCATGAAAGAGAACACACTGCATCTTCAACATCTACTTTGACCACATTCAAATCTCAGATTCAGTTTTTGTGCTTTTTCTGTTCAAAATCTAACATTTTGTCCAAAAGAGAAATCCATATGAGAAGAATTCTAGATGAAACAACAAAAACCTCAACTACCACATTTCCCCCTACAAACCCAACATCAACTACACCAATCACCACACTTCCAGATTCACCAGCCATCATAACAGTTCCATCCACAAGTCCTGTCACAGTTTCACCTCCAAATCCAGTTTCAATGCCTGGAACAGTTCCTTCTACACCACCATCAATTCCCTTAACCCCAACAAACCCAGCAAATTCTCAAGTACCTGTTACTAATCCAGGCACAGCTCCTATTACAGTTCCAGGGACACCACCAGCTGCTACTACTAACAACCCTGTGAGTTCTAACCCACCTTCATTAGGAAACACAAATGCACCAAATACTACTCCTGGGCAGGGTTGGTGTGTGGCAAAAACTGGAGTTCCACAAACTACTCTTCAATCTGCATTGGACTATTGCTGTGGAATGGACAGTGTAGCTTGTTCACAAATACAGCAAGGTGGGAGTTGTTACAATCCAAATTCTTTACAAAACCATGCTTCTGTTGCCTTTAACAGCTATTACCAGAAGAATCCAGCACCAACAAGCTGTGACTTTGGAGGGGCTGCAACCTTAGTTAACACCAATCCAAGCTCTGGATCCTGCATTTACACATCATCTTCTGCATCATCCACAACATCATCTTCAGGAACAGGCATATCCGGCTCGGGTGCCCCAGCTTCAGTTTTTGGGTCCCAGAGCCCTCCACCTGATGCAGATTTCTCACATTCAGCTGGTTTGAAACCTTTTATTGGCTGCATGGTTCTGTTGATATCATTGGTCACTGGAAAAATCAGTGTATGA 1014 0.43 MAKEASMHLLFFSFLIICCSGTLVDLSDHEREHTASSTSTLTTFKSQIQFLCFFCSKSNILSKREIHMRRILDETTKTSTTTFPPTNPTSTTPITTLPDSPAIITVPSTSPVTVSPPNPVSMPGTVPSTPPSIPLTPTNPANSQVPVTNPGTAPITVPGTPPAATTNNPVSSNPPSLGNTNAPNTTPGQGWCVAKTGVPQTTLQSALDYCCGMDSVACSQIQQGGSCYNPNSLQNHASVAFNSYYQKNPAPTSCDFGGAATLVNTNPSSGSCIYTSSSASSTTSSSGTGISGSGAPASVFGSQSPPPDADFSHSAGLKPFIGCMVLLISLVTGKISV* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0254 337 MobiDBLite consensus disorder prediction 78 184 - -
Lan2g0254 337 MobiDBLite consensus disorder prediction 281 309 - -
Lan2g0254 337 MobiDBLite consensus disorder prediction 78 111 - -
Lan2g0254 337 Pfam X8 domain 191 261 IPR012946 -
Lan2g0254 337 MobiDBLite consensus disorder prediction 112 137 - -
Lan2g0254 337 MobiDBLite consensus disorder prediction 138 184 - -
Lan2g0254 337 Gene3D - 187 289 - -
Lan2g0254 337 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 82 289 IPR044965 GO:0004553|GO:0005975
Lan2g0254 337 SMART X8_cls 190 274 IPR012946 -
Lan2g0254 337 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 82 289 - -
Lan2g0254 337 MobiDBLite consensus disorder prediction 281 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0254 Lan-Chr2 2102529 2104921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0254 137 274 Glycoside Hydrolase AT4G26830 41.727 1.89e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0254 - - aip:107645980 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0919 4 11222242 11224862 Lan2g0254 2 2102529 2104921 LSH
Lan2g0254 2 2102529 2104921 Lan8g0362 8 5749259 5752182 PCT
Lan2g0254 2 2102529 2104921 Lan4g1325 4 22073879 22076597 PCT
Lan8g0362 8 5749259 5752182 Lan2g0254 2 2102529 2104921 PCT
Lan4g1325 4 22073879 22076597 Lan2g0254 2 2102529 2104921 PCT