Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0919 ATGGCCAAGGAAGCTTATATGTGCCTCTTATTCCTCTCTTTTCTCATAATCTGTTGTTCTAGTACCATGGTAGGTTTTTCTAATCATGAGAGGGAACACACTGAATCTTCAGTATATACTTTAACCACATTCCTAAAGAAAACCAAAATCACCAAATCTCATATTCAGTTTTTCTGCTTTTTCTGTGCAAAACCTTCCATTTTGTCCAAAACAGAAACCCAAAGAAAATTCCATATGAGAAGAATTCTAGATGACACAAATTCAACACCAACTACACCAATAATCACAGTTCCTTCCACAAATTCTGAAACAGTTCCTTCTACCACAACATCTTTTCCTTTAAGCCCAACAAACCCAGCAAATTCACAAGTAACAGCTCCTACTCCAGTTCTAGGAACACCACCATCTTCTTCTTCTTCTACTACTACTACTGTTCCACCACCATCTTCTACTACTACTACTACTCCTGGACAATTTTGGTGTGTGGCAAAGAATGGAGTTCCAGAAAGTACTATTCAAACTGCACTTGATTATTGTTGTGGAATGGATAGTGTTGCATGTTCACAAATTCAACAGGGTGGGAATTGTTATAATCCAAATTCTTTACAGAACCATGCTTCTGTTGCCTTTAACAGTTACTATCAGAAGAATCCAGCACCAACAAGCTGTGACTTTGGTGGGGTTGCCACCTTAGTTAACACCAATCCAAGCTCAGGATCTTGCATTTACGCATCATCTTCAGGAGGAGCAGGCATATCCAGCTCAAATGGCCCAAACTCAGGTATTGGATCCCAAAGTCCTCCACCTAATGGTGCAGATACCTCACATTCAGTTGGCCTGAGACCATTTATTAGCTGCATGGTTCTGCTGATATCAATAATTCATACTCTAGCTATGCCCTAA 903 0.3976 MAKEAYMCLLFLSFLIICCSSTMVGFSNHEREHTESSVYTLTTFLKKTKITKSHIQFFCFFCAKPSILSKTETQRKFHMRRILDDTNSTPTTPIITVPSTNSETVPSTTTSFPLSPTNPANSQVTAPTPVLGTPPSSSSSTTTTVPPPSSTTTTTPGQFWCVAKNGVPESTIQTALDYCCGMDSVACSQIQQGGNCYNPNSLQNHASVAFNSYYQKNPAPTSCDFGGVATLVNTNPSSGSCIYASSSGGAGISSSNGPNSGIGSQSPPPNGADTSHSVGLRPFISCMVLLISIIHTLAMP* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0919 300 SMART X8_cls 159 243 IPR012946 -
Lan4g0919 300 Pfam X8 domain 160 230 IPR012946 -
Lan4g0919 300 MobiDBLite consensus disorder prediction 254 273 - -
Lan4g0919 300 Gene3D - 153 250 - -
Lan4g0919 300 MobiDBLite consensus disorder prediction 254 275 - -
Lan4g0919 300 MobiDBLite consensus disorder prediction 88 156 - -
Lan4g0919 300 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 31 279 - -
Lan4g0919 300 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 31 279 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0919 Lan-Chr4 11222242 11224862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan4g0919 132 243 Glycoside Hydrolase AT2G05790 41.593 6.50e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0919 - - aip:107645980 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0919 4 11222242 11224862 Lan2g0254 2 2102529 2104921 LSH
Lan4g0919 4 11222242 11224862 Lan8g0362 8 5749259 5752182 PCT
Lan4g0919 4 11222242 11224862 Lan4g1325 4 22073879 22076597 PCT
Lan8g0362 8 5749259 5752182 Lan4g0919 4 11222242 11224862 PCT
Lan4g1325 4 22073879 22076597 Lan4g0919 4 11222242 11224862 PCT