Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0338 ATGGTTGATTATCAAAATGCTGATCATGAACAGTTAATGAAAAGATTCAGGCCTGGTCATTCTGTTGAGGAGGTTTCATATCCTTCAACTCGACAAGCCTCTTGGTCACTGGATGATCTCCCAAGAATGGTTGCAATGACTTTGCATCAAGGATCCTCTGTAATAAGCATGGATTTTCATCCTTCTCACCACACCTTACTTCTTGTTGGTTCTGTTAATGGTGAAATCACCCTCTGGGAACTCAGTTTGCGTGAAAGGTTGGTTTCAAAGCCATTCAAGATATGGGATATGCAGTCATGCTCGTTGCCTTTCCAGGCAGCTGTGGTTAAAGATGCACCCATTTCTGTCAGCCGTGTCACTTGGAGCCCTGATGGGAATTTTGTGGGTGTTGCTTTTACTAAACATTTGATTCACTTATATGCCTATACTGGATCAAATGAGTTAGCCCAGCGTATAGAGGTTGATGCCCATATTGGTGGTGTGAATGACTTGGCATTTGCTCATCCAAATAAACAGCTTTGTATTGTCACTTGTGGGGATGATAAGTTGATAAAGGTGTGGGATTTAAATGGACGGAGGCTATTTCACTTTGAGGGGCATGCAGCACCAGTATATTCTATCTGCCCTCATCACAAAGAGAACATTCAGTTCATATTTTCAACTGCCATTGATGGGAAAATAAAGGCCTGGTTATACGATAACATGGGTTCTAGGGTTGACTATGATGCTCCTGGTCACTGGTGTACTACAATGCTTTACAGTGCTGATGGAAGTAGATTGTTTTCTTGTGGGACGAGTAAGGATGGAGAGTCTTTTCTTGTTGAATGGAATGAAAGTGAAGGAGCCATTAGGAGAACATACAATGGATTCAGAAAGAAATCTACTGGTGTTGTGCAGTTTGACACAACTCAAAATCGCCTTTTGGCTGCAGGTGAAGATGGGCAGATAAAGTTTTGGGACATGGACAATATTAATCTTCTAACAAGTACTGATGCGGATGGTGGATTACAGGGCCTTCCACGCTTGAGATTCAATAAGGAAGGGAATATTCTTGCTGTTACTACTGTGGACAATGGATTCAAGATACTTGCTAATGCTACTGGTCTTAGATCCTTAAGAACAGTTGAAACGCATACATTTGAAGCATTGAGGTCACCCACTGAATCCACTGCAATCAAGGTATCCGGCCCTTCTACTGTTAGCCCTATCAACTGTAAAGTGGAGAGAAGCTCCCCTGTCAGGCCTTCTCCAATTCTTAATGGAGTTGATCCCATTGGTCGAAGTGTAGAGAAACCAAGAACAGTGGAAGATGTAATAGAAAGAACTAAACCATGGCAGCTGTCTGAAATTCTGGATCCTGTCCAATGTCGATTAGTTACCATGCCTGGCAGCACAGATTCTTCCAGCAAGGTTGTTCGACTTTTGTATACGAATTCTGGTGTTGGTATTTTGGCACTTGGTTCAAATGGTATTCAGAAGTTGTGGAAGTGGGCTCGCAATGAGCAGAATCCCACTGGGAAGGCCACAGCCGGTGTTGTTCCCCAACATTGGCAACCCAACAATGGTTTCCTTATGACAAATGATATCTCAGGTGTCAACCTTGAAGAAGCAGTTCCTTGCATTGCACTTTCAAAGAATGACTCCTATGTTATGTCTGCCTGTGGTGGAAAGGTTTCACTATTTAACATGATGACATTCAAGGTAATGACAACATTCATGCCACCGCCTCCTGCCTCTACCTTCTTAGCTTTCCATCCCAAGGATAACAACATTATAGCCATTGGGATGGAGGATTCAACCATTCACATTTACAATGTCAGAGTAGATGAGGTCAAATCAAAATTGAAGGGTCATCAGAAGCGTATTACTGGTTTAGCCTTTTCAACCCATCTTAACATCCTGGTTTCATCTGGCGCTGATGCTCAACTTTGTGTGTGGAGCATTGATACATGGGAGAAAAGAAAAGCAATTCCAATACAATTACCAGCAGGAAAGTCACCTGTTGGTGATACACGAGTCCAGTTCCATTCAGATCAACTCCGCTTATTGGTAGCCCATGAGACCCAGTTGGCAATATATGATGCCTCTAAGATGGATCGCATTCGGCAGTGGGTTCCACAAGATGCTCTGTCTGCTCCCATATCATATGCAACATATTCCTGCAACAGCCAGTTAGTATATGCTACATTTTGTGATGCCAATGTTGGGGTTTTCGATGCGGATACCTTAAGACTTAGATGTCGTATTGCACCATCAATATGCTTGTCACAGGCAGCTTTAAGTGGAAGCCAAGCTGTATATCCTCTTGTTGTTGCAGCTCATCCACTAGAGCCAAACCAGTTTGCTGTTGGGTTAACAGATGGGTCTGTCAGAGTGATAGAACCCACTGAATCAGAGGGTAAGTGGGGATCTTCTCCTCCTATTGACAATGGAATATTGAATAGGACAACATCATCATCTACAACAAGCAACCACACGGCCGATCAGTCCCAACGATAG 2499 0.4314 MVDYQNADHEQLMKRFRPGHSVEEVSYPSTRQASWSLDDLPRMVAMTLHQGSSVISMDFHPSHHTLLLVGSVNGEITLWELSLRERLVSKPFKIWDMQSCSLPFQAAVVKDAPISVSRVTWSPDGNFVGVAFTKHLIHLYAYTGSNELAQRIEVDAHIGGVNDLAFAHPNKQLCIVTCGDDKLIKVWDLNGRRLFHFEGHAAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGSRLFSCGTSKDGESFLVEWNESEGAIRRTYNGFRKKSTGVVQFDTTQNRLLAAGEDGQIKFWDMDNINLLTSTDADGGLQGLPRLRFNKEGNILAVTTVDNGFKILANATGLRSLRTVETHTFEALRSPTESTAIKVSGPSTVSPINCKVERSSPVRPSPILNGVDPIGRSVEKPRTVEDVIERTKPWQLSEILDPVQCRLVTMPGSTDSSSKVVRLLYTNSGVGILALGSNGIQKLWKWARNEQNPTGKATAGVVPQHWQPNNGFLMTNDISGVNLEEAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPKDNNIIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTHLNILVSSGADAQLCVWSIDTWEKRKAIPIQLPAGKSPVGDTRVQFHSDQLRLLVAHETQLAIYDASKMDRIRQWVPQDALSAPISYATYSCNSQLVYATFCDANVGVFDADTLRLRCRIAPSICLSQAALSGSQAVYPLVVAAHPLEPNQFAVGLTDGSVRVIEPTESEGKWGSSPPIDNGILNRTTSSSTTSNHTADQSQR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0338 832 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 67 652 IPR011047 -
Lan8g0338 832 Gene3D - 270 384 IPR015943 GO:0005515
Lan8g0338 832 ProSiteProfiles Trp-Asp (WD) repeats profile. 615 656 IPR001680 GO:0005515
Lan8g0338 832 ProSiteProfiles Trp-Asp (WD) repeats profile. 298 329 IPR001680 GO:0005515
Lan8g0338 832 PANTHER PROTEIN, PUTATIVE-RELATED 1 832 - -
Lan8g0338 832 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 615 650 - -
Lan8g0338 832 ProSiteProfiles Trp-Asp (WD) repeats profile. 154 197 IPR001680 GO:0005515
Lan8g0338 832 MobiDBLite consensus disorder prediction 796 832 - -
Lan8g0338 832 Pfam WD domain, G-beta repeat 614 647 IPR001680 GO:0005515
Lan8g0338 832 Pfam WD domain, G-beta repeat 154 188 IPR001680 GO:0005515
Lan8g0338 832 SUPERFAMILY C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 590 797 IPR011048 -
Lan8g0338 832 SMART WD40_4 565 605 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 608 647 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 526 562 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 234 277 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 190 231 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 41 80 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 145 188 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 280 320 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 97 141 IPR001680 GO:0005515
Lan8g0338 832 SMART WD40_4 753 794 IPR001680 GO:0005515
Lan8g0338 832 MobiDBLite consensus disorder prediction 809 832 - -
Lan8g0338 832 Gene3D - 25 269 IPR015943 GO:0005515
Lan8g0338 832 ProSiteProfiles Trp-Asp (WD) repeats profile. 47 89 IPR001680 GO:0005515
Lan8g0338 832 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 832 IPR027728 GO:0006355
Lan8g0338 832 ProSitePatterns Trp-Asp (WD) repeats signature. 307 321 IPR019775 -
Lan8g0338 832 Gene3D - 532 821 IPR015943 GO:0005515
Lan8g0338 832 ProSitePatterns Trp-Asp (WD) repeats signature. 175 189 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0338 Lan-Chr8 5408442 5414133 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0338 - - gmx:100793575 1561.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0338 8 5408442 5414133 Lan4g1299 4 21789957 21798991 LSH
Lan4g0899 4 10926800 10938923 Lan8g0338 8 5408442 5414133 PCT
Lan2g0274 2 2322757 2332430 Lan8g0338 8 5408442 5414133 PCT
Lan8g0338 8 5408442 5414133 Lan4g0899 4 10926800 10938923 PCT
Lan8g0338 8 5408442 5414133 Lan2g0274 2 2322757 2332430 PCT