Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan7g0306 | ATGGAAATAACAAAAAGTGAGATGAAAGAATCAAGGTTCAAGAGAATTTGTGTGTTTTGTGGAAGCAGCCCTGGGAACAAGACCAGCTATAAGGATGCTGCTATTGAGCTTGGAAAGGAATTGGTGTCAAGAAATATTGATCTGGTATATGGAGGAGGAAGCATTGGTTTGATGGGGTTGGTTTCTCAGGTTGTTTATGATGGTGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTCATGCCAAGTGAGATTACAGGAAAGACAGTAGGGGAAGTGAAAGCAGTAGCAGACATGCATGAAAGGAAAGCAGAGATGGCTAAGCATTCTGATGCCTTTATTGCCTTACCAGGTGGGTATGGGACTCTTGAGGAGCTGCTAGAGGTAATAACTTGGGCTCAGCTTGGCATCCATGATAAACCAGTGGGGTTGGTGAATGTAGATGGATACTACAATTCATTGTTGTCTTTCATTGACAAAGCTGTGGAAGAAGGGTTCATTAGCCCCAAGGCACGCCATATCATTGTATCTGCCCCATCAACAAAAGAACTTGTCAGAAATATGGAGGAATATTTCCCACAACATGAAAAAGTTGCCTCTAAGCTAAGCTGGGAAAATGGGCAACTTGAATATTATTCCTCAAATTGTGACATCTTAACATGA | 663 | 0.4208 | MEITKSEMKESRFKRICVFCGSSPGNKTSYKDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQVVYDGGRHVIGVIPKTLMPSEITGKTVGEVKAVADMHERKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSTKELVRNMEEYFPQHEKVASKLSWENGQLEYYSSNCDILT* | 221 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan7g0306 | 220 | Pfam | Possible lysine decarboxylase | 58 | 188 | IPR031100 | - | |
| Lan7g0306 | 220 | TIGRFAM | TIGR00730: TIGR00730 family protein | 14 | 191 | IPR005269 | GO:0009691|GO:0016787 | |
| Lan7g0306 | 220 | PANTHER | CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 | 5 | 218 | - | - | |
| Lan7g0306 | 220 | PANTHER | LOG FAMILY PROTEIN YJL055W | 5 | 218 | - | - | |
| Lan7g0306 | 220 | SUPERFAMILY | MCP/YpsA-like | 13 | 191 | - | - | |
| Lan7g0306 | 220 | Gene3D | - | 2 | 190 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan7g0306 | Lan-Chr7 | 1985674 | 1988964 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan7g0306 | K22522 | - | gmx:100819644 | 389.808 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan7g0306 | 7 | 1985674 | 1988964 | Lan7g0306 | 7 | 1985674 | 1988964 | ECH | |
| Lan7g0306 | 7 | 1985674 | 1988964 | Lan13g0387 | 13 | 2613983 | 2618248 | LSH | |
| Lan6g1933 | 6 | 30307523 | 30311194 | Lan7g0306 | 7 | 1985674 | 1988964 | PCT | |
| Lan10g0144 | 10 | 905929 | 908908 | Lan7g0306 | 7 | 1985674 | 1988964 | PCT | |
| Lan7g0306 | 7 | 1985674 | 1988964 | Lan6g1933 | 6 | 30307523 | 30311194 | PCT | |
| Lan7g0306 | 7 | 1985674 | 1988964 | Lan10g0144 | 10 | 905929 | 908908 | PCT |