Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0387 ATGGAATTGGAGAGAGAAAGTGAGATGAAAGAATCAAGGTTCAAGAGGATTTGTGTGTTCTGTGGAAGCAGCCCTGGGAATAAGACCACTTATAAGGATGCTGCTATTGAGCTTGGAAAGGAATTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGTATTGGTTTGATGGGGTTGGTTTCTCAAGCTGTTTATGATGGAGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTCATGCCAAGAGAGATTACAGGAGAGACAGTGGGGGAAGTGAAGGCAGTATCAGACATGCATCAAAGAAAAGCAGAAATGGCTAAGCATTCTGATGCCTTTATTGCCTTACCTGGTGGGTATGGAACACTAGAAGAGCTACTTGAGGTGATAACTTGGGCTCAACTTGGGATTCATGATAAACCAGTGGGGTTGCTGAATGTAGATGGATACTATAATTCATTGTTGTCTTTCATTGATAAAGCTGTGGAAGAAGGTTTCATTAGCCCCAAAGCACGCAATATCATTGTTTCTGCTCCATCAACAAAAGAACTTGTCAAGAAAATGGAGGAATATTTCCCACAACATGAAAGAGTTGCCTCTAAACTAAGCTGGGAAAATGGGCAGCCAGAATATTCTTCCTCAGATTGA 651 0.4178 MELERESEMKESRFKRICVFCGSSPGNKTTYKDAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVKAVSDMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARNIIVSAPSTKELVKKMEEYFPQHERVASKLSWENGQPEYSSSD* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0387 216 TIGRFAM TIGR00730: TIGR00730 family protein 15 192 IPR005269 GO:0009691|GO:0016787
Lan13g0387 216 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 4 214 - -
Lan13g0387 216 Pfam Possible lysine decarboxylase 59 189 IPR031100 -
Lan13g0387 216 Gene3D - 3 191 - -
Lan13g0387 216 SUPERFAMILY MCP/YpsA-like 14 192 - -
Lan13g0387 216 PANTHER LOG FAMILY PROTEIN YJL055W 4 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0387 Lan-Chr13 2613983 2618248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0387 K22522 - gmx:100815735 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0306 7 1985674 1988964 Lan13g0387 13 2613983 2618248 LSH
Lan6g1933 6 30307523 30311194 Lan13g0387 13 2613983 2618248 PCT
Lan10g0144 10 905929 908908 Lan13g0387 13 2613983 2618248 PCT
Lan13g0387 13 2613983 2618248 Lan6g1933 6 30307523 30311194 PCT
Lan13g0387 13 2613983 2618248 Lan10g0144 10 905929 908908 PCT