Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1933 ATGGAGAGAGAAAAAGAGAAGAAACAATCCAAATTCAAGAGAATTTGTGTGTTTTGTGGAAGCAGCCCAGGGAATAAAACTAGTTATAAGGATGCTGCTATTGAACTTGGAACTGAATTGGTATCAAGAAATATTGATTTGGTTTATGGAGGAGGTAGCATTGGTTTGATGGGGTTGATTTCTCATGCTGTTTATGATGGTGGTGGCCATGTAATAGGAATCATTCCCAATACACTTAATGCAAGAGAGCTTACAGGAGAAACAGTAGGAGAAGTGAAAGCAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCTAAACATTCTGATGCATTTATTGCTTTACCTGGTGGCTATGGAACACTTGAGGAGCTTCTTGAGGTTATTACTTGGGCCCAACTTGGCATTCATGATAAACCGGTGGGATTGTTGAATGTTGATGGATACTACAATACCCTTTTGACTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATAAGCCCCACAGCTCGTCACATAATTGTGTCTGCCCCAACAGCAAAGGAGCTTGTCAAAAAGATGGAGGAATATTTCCCACAACATGAAAGAGTTGCATCTAAGCTAAGCTGGGAAAATGAACAACAACATTAG 630 0.4048 MEREKEKKQSKFKRICVFCGSSPGNKTSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISHAVYDGGGHVIGIIPNTLNARELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTLLTFIDKAVEEGFISPTARHIIVSAPTAKELVKKMEEYFPQHERVASKLSWENEQQH* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1933 209 Gene3D - 2 189 - -
Lan6g1933 209 SUPERFAMILY MCP/YpsA-like 11 190 - -
Lan6g1933 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Lan6g1933 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Lan6g1933 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 209 - -
Lan6g1933 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1933 Lan-Chr6 30307523 30311194 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1933 K22522 - gmx:100811156 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1933 6 30307523 30311194 Lan10g0144 10 905929 908908 LSH
Lan6g1933 6 30307523 30311194 Lan7g0306 7 1985674 1988964 PCT
Lan6g1933 6 30307523 30311194 Lan13g0387 13 2613983 2618248 PCT
Lan7g0306 7 1985674 1988964 Lan6g1933 6 30307523 30311194 PCT
Lan13g0387 13 2613983 2618248 Lan6g1933 6 30307523 30311194 PCT