Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan10g0144 | ATGGAGAAGGAAATAAAGATGAAACAATCCAAATTCAAGAGGATTTGTGTGTTCTGTGGTAGCAGCCCAGGGAATAAAACTAGTTATAAGGATGCTGCTATTGAGCTTGGATGTGAATTGGTGTCAAGAAATATTGATTTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGATTTCTCATGCTGTTTATGATGGTGGTCGCCATGTAATAGGAGTTATTCCCAAGACACTTAATGCAAGAGAGCTTACAGGAGAAACAGTGGGAGAAGTGAAAGCAGTAGCAAACATGCATCAAAGGAAAGCAGAGATGGCTAAACATTCTGATGCCTTTATTGCTTTACCTGGTGGCTATGGGACACTTGAGGAGCTCCTTGAGGTGATTACCTGGGCCCAACTTGGCATCCATGATAAACCGGTTGGATTGCTGAATGTTGATGGATACTACAATACCTTCTTGACTTTTATTGACAAAGCTGTGGAAGAAGGTTTCATCAGCCCCAAAGCTCGCCATATAATTGTGTCTGCCCCAACAGCAAAGGATCTTGTCAAAAAAATGGAGGAATATTTCCCACAACATGAAAGAGTTGCTTCTAAGCTAAGCTGGGAAAATGAACAACAACTACATTAG | 633 | 0.4155 | MEKEIKMKQSKFKRICVFCGSSPGNKTSYKDAAIELGCELVSRNIDLVYGGGSIGLMGLISHAVYDGGRHVIGVIPKTLNARELTGETVGEVKAVANMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNTFLTFIDKAVEEGFISPKARHIIVSAPTAKDLVKKMEEYFPQHERVASKLSWENEQQLH* | 211 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan10g0144 | 210 | PANTHER | CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE | 1 | 207 | - | - | |
| Lan10g0144 | 210 | TIGRFAM | TIGR00730: TIGR00730 family protein | 13 | 190 | IPR005269 | GO:0009691|GO:0016787 | |
| Lan10g0144 | 210 | Pfam | Possible lysine decarboxylase | 57 | 187 | IPR031100 | - | |
| Lan10g0144 | 210 | PANTHER | LOG FAMILY PROTEIN YJL055W | 1 | 207 | - | - | |
| Lan10g0144 | 210 | Gene3D | - | 2 | 189 | - | - | |
| Lan10g0144 | 210 | SUPERFAMILY | MCP/YpsA-like | 11 | 190 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan10g0144 | Lan-Chr10 | 905929 | 908908 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan10g0144 | K22522 | - | gmx:100780273 | 377.867 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan6g1933 | 6 | 30307523 | 30311194 | Lan10g0144 | 10 | 905929 | 908908 | LSH | |
| Lan10g0144 | 10 | 905929 | 908908 | Lan7g0306 | 7 | 1985674 | 1988964 | PCT | |
| Lan10g0144 | 10 | 905929 | 908908 | Lan13g0387 | 13 | 2613983 | 2618248 | PCT | |
| Lan7g0306 | 7 | 1985674 | 1988964 | Lan10g0144 | 10 | 905929 | 908908 | PCT | |
| Lan13g0387 | 13 | 2613983 | 2618248 | Lan10g0144 | 10 | 905929 | 908908 | PCT |