Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0199 ATGGCGTTACATGATTTGAACGTGCTTATGGTGCTTGCAACTTTGGTTCTAATTCTTATTTCTTCGCCAATTAGCATTGAGTCTGTTTCACCAATTCTTGATGTTTCGTACTTGAATCGGACCAGTTTCCCTCCTGGCTTCATTTTTGGTGCAGCTTCATCAGCATATCAGTATGAAGGTGCAGCAAGAGAAGGTGGCAGAGGACCAAGTATATGGGATACTTTCACTCATAAATATCCACAAAAAATAAAAGATAGAAGCAATGGAGATGTAGCTGATGACTCATATCATAGGTATAAGGAAGATATTGGAATCATGAAGGATATGAATTTTGATGCTTATAGGTTTTCCATTTCTTGGTCCAGAGTCCTACCAGAAGGAAAGCTTAGTGGAGGTGTAAACAAAGAAGGAATAAACTATTATAACAACCTTATTGACGAGCTAATGGCTAATGGTCTGCAACCATATGTGACTATTTTTCATTGGGACGTTCCCCAAGCCTTGGAGGACGAGTATGGTGGTTTTTTCAGCCTTCGTATAGTAGATGATTTTAAGGACTACGCTGAACTTTGCTTCAAGGAATTTGGTGATAGGGTGAGACATTGGATTACTTTGAATGAACCAAGAAGTGTGAGCAAGAATGGCTATGCAACTGGCAGGTTTGCACCCGGTCGGTGTTCTGAATGGCTGAAACTGAATTGCACAAGCGGTGATTCAGGGACGGAGCCATATTTGACTTCACACTACCAACTTCTGGCTCATGCTGCTGCTGCCAATTTGTATAAGACCAAGTATCAGGCATCTCAAAAGGGTTTAATAGGCATTACCTTAAATTCTGACTGGTACATACCCGTTTCTGAAGAGAAAGCAGATCATGATGCTGCACGGCGCGCCGTTGACTTCATGTTTGGATGGTATATGAAGCCACTCACGAAAGGTAAGTATCCAAAAAGTATGCGATCCATGGTGGGAAACCGGCTACCGAAGTTCTCTAGAAAAGAAGTCAAGCAACTTAAGGGGTCGTTTGATTTTCTGGGTCTAAACTACTACTCATCGTTTTATGCTGCCTATGCACCTCATCTACGTGGTGCCAGACCAACCTTACAAACTGATGCTCTTGTTAATGTTACAAATCAGCATGACGGCAAGCCCCTTGGTCCAATGGCTGCTTCAACCTGGTTATGTATTTATCCAAAAGGATTTCTGGAGCTATTGCTCTTCATCAAGAAGGAGTACAACAACCCTGTAATTTATATTACTGAAAATGGTTATGATGAGTACAATGATCCAACACTATCACTTGAAGAAGCCCTTATAGATACTTATAGAGTTGATTACTTTTATCGTCATCTTTATTATCTTCAAATTGCGATCAGGTATGGTGTGAATGTAAAGGGATATTTTGCATGGTCATTGTTGGATAACATGGAATGGGATTCTGGGTATACTGTGCGATTTGGACTCATCTTTGTGGACTTTAAAGATGGGTTGAAGAGATACCTGAAACTATCGGCTCATTGGTTCAAGAATTTTCTCAACAAGTCTTAG 1548 0.407 MALHDLNVLMVLATLVLILISSPISIESVSPILDVSYLNRTSFPPGFIFGAASSAYQYEGAAREGGRGPSIWDTFTHKYPQKIKDRSNGDVADDSYHRYKEDIGIMKDMNFDAYRFSISWSRVLPEGKLSGGVNKEGINYYNNLIDELMANGLQPYVTIFHWDVPQALEDEYGGFFSLRIVDDFKDYAELCFKEFGDRVRHWITLNEPRSVSKNGYATGRFAPGRCSEWLKLNCTSGDSGTEPYLTSHYQLLAHAAAANLYKTKYQASQKGLIGITLNSDWYIPVSEEKADHDAARRAVDFMFGWYMKPLTKGKYPKSMRSMVGNRLPKFSRKEVKQLKGSFDFLGLNYYSSFYAAYAPHLRGARPTLQTDALVNVTNQHDGKPLGPMAASTWLCIYPKGFLELLLFIKKEYNNPVIYITENGYDEYNDPTLSLEEALIDTYRVDYFYRHLYYLQIAIRYGVNVKGYFAWSLLDNMEWDSGYTVRFGLIFVDFKDGLKRYLKLSAHWFKNFLNKS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0199 515 PRINTS Glycosyl hydrolase family 1 signature 341 355 IPR001360 GO:0004553|GO:0005975
Lan7g0199 515 PRINTS Glycosyl hydrolase family 1 signature 417 425 IPR001360 GO:0004553|GO:0005975
Lan7g0199 515 PRINTS Glycosyl hydrolase family 1 signature 440 451 IPR001360 GO:0004553|GO:0005975
Lan7g0199 515 PRINTS Glycosyl hydrolase family 1 signature 461 478 IPR001360 GO:0004553|GO:0005975
Lan7g0199 515 PRINTS Glycosyl hydrolase family 1 signature 485 497 IPR001360 GO:0004553|GO:0005975
Lan7g0199 515 Gene3D Glycosidases 29 514 - -
Lan7g0199 515 Pfam Glycosyl hydrolase family 1 41 514 IPR001360 GO:0004553|GO:0005975
Lan7g0199 515 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 34 514 - -
Lan7g0199 515 PANTHER GLYCOSYL HYDROLASE 34 514 IPR001360 GO:0004553|GO:0005975
Lan7g0199 515 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
Lan7g0199 515 SUPERFAMILY (Trans)glycosidases 31 513 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0199 Lan-Chr7 1215571 1219880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0199 12 514 Glycoside Hydrolase AT5G44640 54.365 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0199 - K01188 gmx:100801874 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0199 7 1215571 1219880 Lan7g0199 7 1215571 1219880 ECH
Lan7g0199 7 1215571 1219880 Lan8g1761 8 24266572 24272701 LSH
Lan6g2177 6 32164443 32172779 Lan7g0199 7 1215571 1219880 PCT
Lan10g0322 10 2138486 2145481 Lan7g0199 7 1215571 1219880 PCT