Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g2135 ATGGGCTTCAAACTCATAAAAATGTTGAATGTGAAAGTGGTGTTGCTGCTGCTAGCATCTTCACTTATTGCTTTTGCTACAGCTTCTGTGTCATATGATTCCAAAGCTATTACCATTAATGGCCAAAGAAGGATCCTCATTTCTGGATCCATTCATTACCCTAGAAGCACTCCTGAGATGTGGCCAGATCTTGTTCAGAAGGCTAAGGAAGGAGGCTTGGATGTGATTCAGACTTATGTATTCTGGAATGGGCATGAACCTGAACCTGGCAAATATTATTTTGAGGGTAACTATGATTTGGTGAAGTTCATAAAGTTAGTACAACAAGCAGGCCTTTATGTTAATCTCAGGATTGGTCCTTATGTTTGTGCTGAGTGGAATTTTGGGGGTTTCCCTGTTTGGTTGAAGTACATTCCAGGTATCAGCTTCAGAACAGACAATGGCCCTTTTAAGTTTCAAATGCAAAAATTTACCAAGAAGATTGTGAACATGATGAAAGCAGAAAGGTTATATGAGTCTCAAGGAGGTCCAATAATTCTATCACAGATCGAAAATGAATATGGACCTATGGAGTATGAAATCGGTGCTCCGGGTAAATCTTACACTAAGTGGGCAGCAGATATGGCTCTAGGACTTGGTACCGGGGTTCCATGGATAATGTGCAAGCAAGATGATGCTCCTGATCCTATTATTAACACTTGCAATGGCTTCTATTGTGATTATTTCACTCCAAATTCAGCTCACAAGCCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACGGAGTTTGGAGGTCCAGTTCCTTATCGACCTGCCGAAGACTTGGCATTCTCGGTTGCAAGGTTTATACAGAAAGGGGGATCATTTGTCAATTATTACATGTATCACGGGGGAACAAATTTTGGTCGCACTGCTGGTGGACCCTTTATTGCTACAAGCTATGATTATGATGCACCTCTGGATGAATATGGACTACTCAGGCAACCAAAGTGGGGACATTTGAAGGATTTACACAGAGCAGTAAAACTCTGTGAACCTGCTTTAGTAGCGGCAGATCCCACGGTAACACAGATCGGAGACTATCAAGAGGCTCATGTCTTTAAATCAAAGTCGGGAGCTTGTGCTGCATTCCTTGCAAACTATAACCCAAAATCTTATGCAAAGGTAGCATTTGGAAATATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAATCACACGGTTTACAACACCGCACGGATTGGTTCTCAGAGTGCACGGATGAAGATGACTCGTGTCCCTATTCATGGAGGACTCTCTTGGCAAGCATTCAATGAAGAAACAGCTTCTACCGATGATAGTACCTTCACCATGACTGGCCTGTTGGAGCAGTTAAATACAACAAGAGATTCATCTGACTACCTGTGGTACTCCACCGATGTTGTGATTGATCCCAAAGAAGGATTTTTGTGGAAAGGAAAGGACCCTGTTCTCACAGTACTATCTGCCGGGCATGCTTTGCATGTTTTTGTCAATGGTCAGCTATCAGGATCTATATACGGAAGCTTAGAATTCCCGAAACTAACATTTAGTGAGGGTGTGAATCTCAGAGCTGGTGTTAACAAAATCTCTCTTCTAAGTGTTGCAGTTGGGCTCCCGAATGTTGGTCCACACTTTGAGACATGGAATGCTGGTGTTCTTGGTCCAATTTCATTAAACGGCCTCGATGAGGGGAGAAGGGACTTAACTTGGCAGAAATGGTCTTACAAGGTTGGTCTTAAAGGCGAAACCTTGAGTCTTCATTCTCTCAGCGGAACTTCCACAGTGGAGTGGATTCAAGGGTCTTTAATTTCTCGAAAACAGCCATTGACTTGGTACAAAACTAATTTTGATGCCCCTGCTGGAGATTCACCATTTGCTTTAGACATGGGCAGCATGGGCAAAGGTCAAGTATGGCTAAATGGAAAAAGTCTCGGCCGCTACTGGCCTGCTTATAAAGCATCTGGTACCTGTGATTATTGCAGCTATGCTGGAACTTATACCGAGACTAAATGCAGAAGTAATTGCGGCGAGGCTTCACAAAGATGGTATCATGTTCCCCATTCATGGCTGATGCCAACTGGAAATTTATTGGTTGTGTTCGAAGAACTAGGTGGCGATCCAAACGGGATATTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATCTATGAGTGGCAGCCAAATCTTAGAAGTTATCAGATGCAAGTTTCGGGCAAAGTTAGAAAACCTGTGAGACCGAAAGCACATTTATCATGTGGACCAGGGCAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGTACTCCATTAGGGTCTTGTGGAAACTTCCTTCAAGGTGGATGTCATGCTCACAAGTCATATGATGCATTTGAAAGGAATTGTATTGGACAAAACTGGTGCACAGTAACATTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAAATGTTATGAAGAAACTTGCAGTAGAAGCTATTTGTACCTAA 2532 0.4258 MGFKLIKMLNVKVVLLLLASSLIAFATASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLVQKAKEGGLDVIQTYVFWNGHEPEPGKYYFEGNYDLVKFIKLVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKFQMQKFTKKIVNMMKAERLYESQGGPIILSQIENEYGPMEYEIGAPGKSYTKWAADMALGLGTGVPWIMCKQDDAPDPIINTCNGFYCDYFTPNSAHKPKMWTEAWTGWFTEFGGPVPYRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAVKLCEPALVAADPTVTQIGDYQEAHVFKSKSGACAAFLANYNPKSYAKVAFGNMHYNLPPWSISILPDCNHTVYNTARIGSQSARMKMTRVPIHGGLSWQAFNEETASTDDSTFTMTGLLEQLNTTRDSSDYLWYSTDVVIDPKEGFLWKGKDPVLTVLSAGHALHVFVNGQLSGSIYGSLEFPKLTFSEGVNLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPISLNGLDEGRRDLTWQKWSYKVGLKGETLSLHSLSGTSTVEWIQGSLISRKQPLTWYKTNFDAPAGDSPFALDMGSMGKGQVWLNGKSLGRYWPAYKASGTCDYCSYAGTYTETKCRSNCGEASQRWYHVPHSWLMPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLRSYQMQVSGKVRKPVRPKAHLSCGPGQKISSIKFASFGTPLGSCGNFLQGGCHAHKSYDAFERNCIGQNWCTVTLSPENFGGDPCPNVMKKLAVEAICT* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g2135 843 Pfam Glycosyl hydrolases family 35 37 341 IPR031330 -
Lan6g2135 843 Gene3D - 596 734 - -
Lan6g2135 843 ProSiteProfiles SUEL-type lectin domain profile. 757 843 IPR000922 GO:0030246
Lan6g2135 843 SUPERFAMILY Galactose-binding domain-like 404 575 IPR008979 -
Lan6g2135 843 SUPERFAMILY (Trans)glycosidases 30 346 IPR017853 -
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 SUPERFAMILY Galactose-binding domain-like 584 747 IPR008979 -
Lan6g2135 843 PANTHER BETA-GALACTOSIDASE 8 837 - -
Lan6g2135 843 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Lan6g2135 843 Pfam Galactose binding lectin domain 765 842 IPR000922 GO:0030246
Lan6g2135 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Lan6g2135 843 PANTHER BETA-GALACTOSIDASE RELATED 8 837 IPR001944 GO:0004553|GO:0005975
Lan6g2135 843 Gene3D Glycosidases 26 346 - -
Lan6g2135 843 Gene3D - 758 843 IPR043159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g2135 Lan-Chr6 31829004 31837441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g2135 1 843 Glycoside Hydrolase AT3G13750 79.339 0.0 1438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g2135 - - gmx:100811187 1577.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2135 6 31829004 31837441 Lan10g0285 10 1858127 1864297 LSH
Lan6g2135 6 31829004 31837441 Lan5g0619 5 12683204 12691300 PCT
Lan6g2135 6 31829004 31837441 Lan2g0405 2 4154253 4159843 PCT
Lan5g0619 5 12683204 12691300 Lan6g2135 6 31829004 31837441 PCT
Lan2g0405 2 4154253 4159843 Lan6g2135 6 31829004 31837441 PCT