Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0619 ATGGGTTTCAAGCTCATAATGTGGAGGAATATGCTACTTGTTCTAGTGGTGCTATCATTTTCACTGAGCAGTCATGTTTCTGCTTCTGTTTCATATGACCATAATGCTATTACCATCAATGGACAAAGAAAAATACTGCTCTCTGGATCCATTCATTACCCCAGAAGCACCCCTCAGATGTGGCCAGGTCTCATCCAAAAGGCCAAGGAAGGAGGTTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGGCATGAACCTGCACCTGGCAAATATTATTTTGAGGGGAACTATGATCTTGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGTCTTTATGTTCACCTTAGGATTGGTCCTTATGTCTGTGCTGAATGGAACTTTGGTGGTTTCCCTGTTTGGCTCAAGTACATTCCAGGTATCGACTTCAGAACAAACAATGGACCATTTAAGTTTCAAATGCAAAAATTTACCACAAAGATTGTGAATATCATGAAAGCAGAAAGGCTATATGAGTCTCAGGGTGGTCCAATAATTCTATCTCAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTCCTGGTCAAGCCTATACTCAGTGGGCAGCAAATATGGCTCTCGGACTTGGTACCGGAGTTCCGTGGGTCATGTGCAAGCAAGATGATGCTCCTGATCCTATTATTAACACTTGTAACGGCTTCTATTGTGATTATTTCTCTCCAAATAAAGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACCGAGTTCGGAGGTCCAGTTCCTCATAGACCTGCTGAGGACTTGGCATTTTCGGTTGCAAAGTTTATCCAGAAGGGAGGATCATTTGTCAATTATTACATGTATCACGGGGGAACAAATTTTGGCCGAACCGCCGGTGGTCCCTTTATTGCTACAAGCTATGATTATGATGCACCTCTTGATGAATATGGACTTCTCAGGCAGCCAAAGTGGGGTCATCTAAAGGATTTACACAGAGCAATAAAACTCTGTGAACCTGCTTTAGTATCTGGAGATCCTACCGTAACATGGCTCGGAAACTATCAAGAGGCTCATGTCTTTAAATATAAGGCTGGAGGTTGTGCTGCATTTCTTGCAAATTATAACTCGTGGTCTTATGCAACGGTAGCATTTGGAAATTCACGTTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCGGACTGCAAGCACACTGTTTATAACACTGCAAGGGTTGGTTCCCAGAGCGCACAAATGAAGATGACTCGTATTCCTATTCATGGAGGACTCTCTTGGAGTGCATTCAATGAAGAAACAACCTCAACTGATGATAGTTCATTCACTCTGGTTGGCCTATTGGAACAGTTAAACACAACAAGAGATTTATCTGACTACTTATGGTACTCTACAGATGTTGTGATCAATTCGAACGAAGGGTTTTTGTGGAACGGAAAGAGTCCTGCCCTTACAGTATCATCTGCTGGACATGCTTTGCATGTTTTTGTCAATGGTCAGCTGTCAGGATCTGCATATGGAAGCTTAGACATCCCTAAACTGACCTTTAGTGAAAGTGTGCATCTTAGAGCCGGTGTTAACAAAATCTCTCTGCTAAGCGTTGCAGTTGGGCTCCCGAATGTTGGTCCACATTTTGAGAAATGGAATGCTGGTGTTCTTGGTCCAGTTACATTAGATGGTCTCAATGATGGAAGAAGGGACTTAACTTGGCAGAAATGGTCTTACAAGGTTGGTCTTAAAGGTGAAGCCTTGAGTCTTCATTCTCTTAGTGGAAGTTCCTCTGTTGAGTGGCTTCAGGGATTTTTAGCTTCTCGAAGGCATCCATTGACTTGGTACAAAACTACTTTTGATGCTCCGATCGGAGTTGCACCATTGGCTTTAGACATGGGCGGTATGGGCAAGGGTCAAGTGTGGATAAATGGACAGAACATAGGCCGCTATTGGCCTGCTTATAAAGCATCCGGTTCTTGTGAATACTGTAACTATGCAGGAAATTATGATGAGAAGAAATGCACAAGTAACTGCGGCGAAGCATCTCAAAGATGGTACCATGTTCCTCATTCATGGCTGAAGCCGACCGGAAATTTATTGGTTGTGTTCGAGGAATTAGGTGGCGACCCGAATGGTATATTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATTTATGAGTGGCAGCCAAATCTTGTAAGTTATCAGATGCAATCTTCTGGCAAAGTTAGCATACCTGTGAGACCGAAAGCGCATTTGTCATGTGGTCCGGGACAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGAACTCCAATAGGGTCTTGTGGAAACTACCATGAAGGAAGTTGTCATGCACATAATTCATATGATGCCTTTCAAAGGAACTGTGTTGGGCAGAGCTTGTGCACAGTGACAGTGTCACCTGAAATGTTTGGAGGAGATCCATGTCCCAATGTAATGAAGAAACTCTCAGTGGAAGCCATTTGCACTTAA 2532 0.4277 MGFKLIMWRNMLLVLVVLSFSLSSHVSASVSYDHNAITINGQRKILLSGSIHYPRSTPQMWPGLIQKAKEGGLDVIQTYVFWNGHEPAPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGIDFRTNNGPFKFQMQKFTTKIVNIMKAERLYESQGGPIILSQIENEYGPMEYEIGAPGQAYTQWAANMALGLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDLAFSVAKFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPTVTWLGNYQEAHVFKYKAGGCAAFLANYNSWSYATVAFGNSRYNLPPWSISILPDCKHTVYNTARVGSQSAQMKMTRIPIHGGLSWSAFNEETTSTDDSSFTLVGLLEQLNTTRDLSDYLWYSTDVVINSNEGFLWNGKSPALTVSSAGHALHVFVNGQLSGSAYGSLDIPKLTFSESVHLRAGVNKISLLSVAVGLPNVGPHFEKWNAGVLGPVTLDGLNDGRRDLTWQKWSYKVGLKGEALSLHSLSGSSSVEWLQGFLASRRHPLTWYKTTFDAPIGVAPLALDMGGMGKGQVWINGQNIGRYWPAYKASGSCEYCNYAGNYDEKKCTSNCGEASQRWYHVPHSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLVSYQMQSSGKVSIPVRPKAHLSCGPGQKISSIKFASFGTPIGSCGNYHEGSCHAHNSYDAFQRNCVGQSLCTVTVSPEMFGGDPCPNVMKKLSVEAICT* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 PANTHER BETA-GALACTOSIDASE 8 837 - -
Lan5g0619 843 Pfam Galactose binding lectin domain 765 842 IPR000922 GO:0030246
Lan5g0619 843 PANTHER BETA-GALACTOSIDASE RELATED 8 837 IPR001944 GO:0004553|GO:0005975
Lan5g0619 843 SUPERFAMILY Galactose-binding domain-like 584 752 IPR008979 -
Lan5g0619 843 Gene3D Glycosidases 26 346 - -
Lan5g0619 843 Gene3D - 601 734 - -
Lan5g0619 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Lan5g0619 843 ProSiteProfiles SUEL-type lectin domain profile. 757 843 IPR000922 GO:0030246
Lan5g0619 843 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Lan5g0619 843 Pfam Glycosyl hydrolases family 35 37 341 IPR031330 -
Lan5g0619 843 Gene3D - 448 587 - -
Lan5g0619 843 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
Lan5g0619 843 Gene3D - 748 843 IPR043159 -
Lan5g0619 843 SUPERFAMILY Galactose-binding domain-like 404 575 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0619 Lan-Chr5 12683204 12691300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0619 14 843 Glycoside Hydrolase AT3G13750 79.518 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0619 - - gmx:100785688 1575.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0619 5 12683204 12691300 Lan2g0405 2 4154253 4159843 LSH
Lan6g2135 6 31829004 31837441 Lan5g0619 5 12683204 12691300 PCT
Lan10g0285 10 1858127 1864297 Lan5g0619 5 12683204 12691300 PCT
Lan5g0619 5 12683204 12691300 Lan6g2135 6 31829004 31837441 PCT
Lan5g0619 5 12683204 12691300 Lan10g0285 10 1858127 1864297 PCT