Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0405 ATGTGCTTTTCCAACAAGCTCATAATGTGGAGGAATGTGCTACTTGTTCTGGTGATGCTATCATTTTCACTCATTGGTCATACTTCTGCATCTGTCTCTTATGACCATAATGCTATTTCCATCAATGGACAAAGAAAGATACTGCTTTCTGGATCCATTCATTACCCCAGAAGCACCCCTCAGATGTGGCCAGATCTTATCCAGAAGGCCAAGGAAGGAGGTTTGGATGTGATTCAGACTTATGTTTTCTGGAATGGACATGAACCTTCACCTGGCAAATATTATTTTGAGGGGAACTATGATCTTGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGCCTCTATGTTCACCTTAGGATTGGTCCTTATGTATGTGCTGAGTGGAACTTTGGTGGTTTCCCTGTTTGGCTCAAGTACATTCCAGGTATCAGCTTCAGAACAAACAATGAACCATTTAAGTTTCAAATGCAAAAGTTTACGACGAAGATTGTGAATATTATGAAAGCAGAAAGGTTATATGAGTCTCAGGGTGGTCCAATAATTCTTTCCCAGATTGAAAATGAATATGGACTTATGGATGGTGCTCCTGGTAAAGCCTACACTCAGTGGGCAGCAGATATGGCTGTAAGACTTGGTACTGGCGTTCCGTGGGTCATGTGCAAGCAAGATGATGCTCCTGATCCTGTTATCAACACTTGTAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACCGAGTTTGGAGGACCAGTTCCTCACAGGCCTGCTGAGGACATGGCATTTTCAGTTGCAAGGTTTATACAGAAAGGGGGATCATTTGTCAATTATTATATGTATCACGGGGGAACAAATTTTGGTCGAACCGCTGGTGGTCCTTTTATTGCTACAAGCTATGATTATGATGCACCTCTTGATGAATATGGACTGCTCAGGCAGCCTAAGTGGGGTCATCTGAAGGATTTACACAGAGCAATAAAACTCTGTGAACCTGCTTTAGTGTCCGGAGATCCTACTGTAACACCGCTCGGAAAATATCAAGAGGCTCATGTCTTCAAATATAAGGCTGGAGGTTGTGCTGCATTCCTTTCAAACTATAACCCACGATCTTATGCAACGGTGGAGTTTGGAAATTTGCATTATAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAGCACACTGTTTATAACACTGCAAGGGTTGGTTCGCAGAGCGCACAGATGAAGATGACTCGTGTTCCTATTCACGGAGGACTCTCTTGGAGTGCATTCAATGAAGAGACAACTTCTACCGATGACAGTTCTTTCACTGTGACTGGCCTGTTGGAGCAATTAAACACAACAAGAGATTTATCTGACTACTTGTGGTACTCCACAGATGTTGTGATCAATTCCAACGAAGGATTTTTGAGGAACGGAAAGAGTCCCGTCCTTACAGTATTATCGGCTGGGCATGCTTTGCATGTTTTTGTAAATGGCCAGCTGTCAGGAACTGCATATGGAAGCTTAGGATCCCCTAAACTAACCTTTAGTGAGAGTGTGAATCTTCGAGCTGGCATTAACAAAATCTCTCTTCTAAGTGTTGCAGTCGGTCTCCCGAATGTTGGTCCACATTTCGAAAGATGGAATGCCGGTGTTCTTGGCCCAATCACATTAAATGGTCTCAATGAGGGGAGAAGGGACTTAACATGGCAGAAGTGGTCTTACAAGGTTGGTCTTAAAGGTGAAGCTTTGCGTCTTCATTCTCTTAGTGGAAGCTCCTCTGTTGAGTGGTTTCGGGGTTTTTTAGTTTCCCGAAGGCAGCCCTTGACTTGGTACAAAACTACTTTCTATGCCCCCGCCGGAGTTGCACCATTGGCTTTAGACATGGATAGCATGGGCAAAGGTCAAGTGTGGATAAACGGACAGCATCTAGGCCGCTATTGGCCTGCTTATACAGCATCTGGTTCTTGTGAAGACTGTAACTATGCAGGAACATATAATGAGAAAAAATGCGGAAGCAACTGCGGCGAGGCTTCTCAAAGATGGTACCATGTTCCTCATTCCTGGCTGAAGCCAACTGAAAATTTATTGGTTGTGTTTGAAGAATTGGGTGGAGACCCCAATGGGATCCATTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATTTATGAATGGCAACCAAATCTTGTAAGTTATGAGATGCAAGCTTCTGGCAAAATTAACAAACCTTTGAGACCAAAAGCACATTTGTCATGTGGTCCTGGACAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGCACTCCTGTAGGGTCTTGTGGAAACTACCATGAAGGAAACTGTCATGCTCACAAATCATATGATGCCTTTCAAAGGAACTGTGTTGGGCAAAGCTGGTGCACAGTGACAGTGTCACCTGAAATATTTGGAGGAGATCCATGCCCCAATGTAATGAAGAAACTCTCTGTGGAGGCCATTTGTACATAA 2529 0.4334 MCFSNKLIMWRNVLLVLVMLSFSLIGHTSASVSYDHNAISINGQRKILLSGSIHYPRSTPQMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTNNEPFKFQMQKFTTKIVNIMKAERLYESQGGPIILSQIENEYGLMDGAPGKAYTQWAADMAVRLGTGVPWVMCKQDDAPDPVINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDMAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPTVTPLGKYQEAHVFKYKAGGCAAFLSNYNPRSYATVEFGNLHYNLPPWSISILPDCKHTVYNTARVGSQSAQMKMTRVPIHGGLSWSAFNEETTSTDDSSFTVTGLLEQLNTTRDLSDYLWYSTDVVINSNEGFLRNGKSPVLTVLSAGHALHVFVNGQLSGTAYGSLGSPKLTFSESVNLRAGINKISLLSVAVGLPNVGPHFERWNAGVLGPITLNGLNEGRRDLTWQKWSYKVGLKGEALRLHSLSGSSSVEWFRGFLVSRRQPLTWYKTTFYAPAGVAPLALDMDSMGKGQVWINGQHLGRYWPAYTASGSCEDCNYAGTYNEKKCGSNCGEASQRWYHVPHSWLKPTENLLVVFEELGGDPNGIHLVRRDIDSVCADIYEWQPNLVSYEMQASGKINKPLRPKAHLSCGPGQKISSIKFASFGTPVGSCGNYHEGNCHAHKSYDAFQRNCVGQSWCTVTVSPEIFGGDPCPNVMKKLSVEAICT* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0405 842 PANTHER BETA-GALACTOSIDASE 10 836 - -
Lan2g0405 842 Gene3D - 610 733 - -
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 SUPERFAMILY Galactose-binding domain-like 403 574 IPR008979 -
Lan2g0405 842 Gene3D Glycosidases 28 345 - -
Lan2g0405 842 SUPERFAMILY Galactose-binding domain-like 583 746 IPR008979 -
Lan2g0405 842 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
Lan2g0405 842 Gene3D - 447 586 - -
Lan2g0405 842 PANTHER BETA-GALACTOSIDASE RELATED 10 836 IPR001944 GO:0004553|GO:0005975
Lan2g0405 842 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Lan2g0405 842 Gene3D - 758 842 IPR043159 -
Lan2g0405 842 SUPERFAMILY (Trans)glycosidases 30 345 IPR017853 -
Lan2g0405 842 Pfam Glycosyl hydrolases family 35 39 340 IPR031330 -
Lan2g0405 842 Pfam Galactose binding lectin domain 764 841 IPR000922 GO:0030246
Lan2g0405 842 ProSiteProfiles SUEL-type lectin domain profile. 756 842 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0405 Lan-Chr2 4154253 4159843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0405 16 842 Glycoside Hydrolase AT3G13750 79.880 0.0 1413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0405 - - gmx:100785688 1590.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0619 5 12683204 12691300 Lan2g0405 2 4154253 4159843 LSH
Lan6g2135 6 31829004 31837441 Lan2g0405 2 4154253 4159843 PCT
Lan10g0285 10 1858127 1864297 Lan2g0405 2 4154253 4159843 PCT
Lan2g0405 2 4154253 4159843 Lan6g2135 6 31829004 31837441 PCT
Lan2g0405 2 4154253 4159843 Lan10g0285 10 1858127 1864297 PCT