Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1774 ATGATGGATCCAAGTAACCTTTCATTTGGTGATGGGATCGAAGTGGTTCACCAAAATGGTGTTCATCGCGAGCCTTCAAATTCTGGAGAGGATAGCGTTGTTTCAAATGATTTAGACATCAATCTTACTGAAAGTACAGAATCTCTACCCCAAAATGGAAATTTCGAAAATCTCAACCAGGCCGATGGCACTGTAACTGAGAACTCATCTGTGGCCGCAAAAATCAAAATATTAAATGAAAACACCAAGGGCAACAATGTGACCCTTGCTAAGGAAGAGGGAGTGAAAATCACAAATCAAACAGGACAATTAAAAGCACAAAAGGATCCTGTTAAGAATAAGAATGCTAAGGCCTCAGCTTCCAGTGGTGTCCACTCAAGTTTGGTGAAAAGGAACAAAATTGCGAAAGATAAAGAGGAAGCATCTTCTGTTTCAAATGGTGCATCGGCTTTAGACTCGTGCACAAGACAGCCTATTAATAGCAGATCATTGAATAACCGGCAGACTCGATTGTCCATGCGCCCTTCGAAGTCTGATGCATCGTCTTCTGATGTAGCTACGGAGAAGACAAAACCAAAATCATTGAAAAAAGGATCAGTAGATAAAGGTCAAGGAGAAGCAGAATCTTCTTCTACCAATGCCGAAGATTCCAAACCTCGCAAGGTGGGGACACTTCCAAATTATGGATTCAGTTTAAGGTGTGGTGAAAGAGCTGAGAAAAGAAGAGAGTTCTACAGTAAAATTGAGGAAAAGATTCATGCAAAGGAGGTTGAAAATAGTAACTTGCAAGCAAAATCCAAGGAGTCACGAGATGCCGAGATTAAGATTCTTAGGAAGAGTCTAACATTTAAAGCAACTCCTTTGCCAACTTTCTACCAGGAGCCTCCTCCTCCTAAGGTGGAGTTTAAGAAGATACCAACTACAAGACCTAAATCTCCCAAGCTTGGTCGTAAGAAGAGTTCAATCAATTCTGAGTCAGATGGAAACACTAGCAGCAGTTCTCAACAAGGTCGTATAAGTTTCGACGAGAAAACGTACCAGAGTAATAACCCTACTAAAGGAGTTACTCCTATCCATCCAAAGAAGCCACTACGGAAATCTCTTCATGCTCGACTTGCTACTAGAAAGCTCAATTCACCCAATTCAAAAACCGCACTGCAAGGTCCATCTGAACCAAGGAAGATCGAAAAGACTGTATCTAGCTCGACAAAGAAAGATATCACTCCATCCAATGCTACAGAGGAAGAGAAAATTCCGATACCTGCGACCAATGAAGAGGACAGCACATTGCCCAGCGAGACGAGTGAGGCTCTGCCCCTGAATGTGGTTCATTCAGACAAGCCGAGTGAAACGGAGTCTGGTGTGAATGGTGATCCAGTGGAAGAAGATAATCCTCAGCTTCCCTTTACTCAAGAATCCATCAAGGCAGAACATTAA 1437 0.4231 MMDPSNLSFGDGIEVVHQNGVHREPSNSGEDSVVSNDLDINLTESTESLPQNGNFENLNQADGTVTENSSVAAKIKILNENTKGNNVTLAKEEGVKITNQTGQLKAQKDPVKNKNAKASASSGVHSSLVKRNKIAKDKEEASSVSNGASALDSCTRQPINSRSLNNRQTRLSMRPSKSDASSSDVATEKTKPKSLKKGSVDKGQGEAESSSTNAEDSKPRKVGTLPNYGFSLRCGERAEKRREFYSKIEEKIHAKEVENSNLQAKSKESRDAEIKILRKSLTFKATPLPTFYQEPPPPKVEFKKIPTTRPKSPKLGRKKSSINSESDGNTSSSSQQGRISFDEKTYQSNNPTKGVTPIHPKKPLRKSLHARLATRKLNSPNSKTALQGPSEPRKIEKTVSSSTKKDITPSNATEEEKIPIPATNEEDSTLPSETSEALPLNVVHSDKPSETESGVNGDPVEEDNPQLPFTQESIKAEH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1774 478 MobiDBLite consensus disorder prediction 317 355 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 285 478 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 100 128 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 21 62 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 100 230 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 374 388 - -
Lan6g1774 478 Pfam Targeting protein for Xklp2 (TPX2) domain 230 300 IPR027329 -
Lan6g1774 478 MobiDBLite consensus disorder prediction 20 62 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 204 218 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 184 203 - -
Lan6g1774 478 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 468 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 425 439 - -
Lan6g1774 478 Coils Coil 245 265 - -
Lan6g1774 478 MobiDBLite consensus disorder prediction 142 183 - -
Lan6g1774 478 PANTHER PROTEIN WVD2-LIKE 4 2 468 IPR044833 GO:0008017
Lan6g1774 478 MobiDBLite consensus disorder prediction 251 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1774 Lan-Chr6 29010198 29013517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1774 - - gmx:100788524 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1774 6 29010198 29013517 Lan3g1712 3 29659513 29663197 LSH
Lan6g1774 6 29010198 29013517 Lan15g1032 15 19408430 19413326 PCT
Lan6g1774 6 29010198 29013517 Lan14g0809 14 14926731 14931406 PCT
Lan6g1774 6 29010198 29013517 Lan3g1076 3 23080516 23085282 PCT
Lan15g1032 15 19408430 19413326 Lan6g1774 6 29010198 29013517 PCT
Lan14g0809 14 14926731 14931406 Lan6g1774 6 29010198 29013517 PCT
Lan3g1076 3 23080516 23085282 Lan6g1774 6 29010198 29013517 PCT