Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1032 ATGATGGATCCAAGTAACTTGTCGCCTGCGAACGGGCTTGAAGCAATCCACCAAAATGGTGTTCATGAAGAATCATCTAATTCTGGAAAAGATGTTGTTTCAAATAGTGTAGACCCCAGTGTTAATGAAATCGCAGAAACTGTAGCTCTAAATGGAAATATTGAAAATTTCGACCAGTCAGATAGCACTGTAAGCAGTAACTCATATACGGCAGCAATCAAAGGAGGATCAATTGATACTGTGGATGGCAACAATGGCACCATTCCTAAGGAAGAGGAAGTCAAAATCATGGACCAAAAAGTGCAATCAAGAGCACAGAAGGGTCATGTCAAGAACAAGACTGTAAAGCCCCCCAGTCCCCGGGGTACTTCTTCAAGTTTGGTAAAGAAGAGCAAAGACGGAAAATGTGAAGAGGCATCACCTGCTGTTCCAAATGGTACTTCGGCTTTAGGCTCTAACCCAAGACAGCCTATAAAAAATAAATCATTCAATGACAAGCAGACTCAGCCAAAGCCTGCAAAACCTGATGCAGCATCTTCCGAAGCACCTATGGAGAAGACTAAACCAAGTTCATTGAAGAAAGGGCTGCCTGATAATGTCAAAGGAAAAGAAGAATCTTCTACTCCTACTGCACAAGATGCCAAACCTCGCATGGTGGGGGTACGTCCAAACTATGGATTCAGGTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAAACAGTTTTATACACAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGGAGAGTACACTGCAAGCTAAAACTAAGGAGACCCAAGAAGCCGAGATTAAAATGCTTAGGAAAACTCTAGCATTTAAAGCTACTCCAATGCCAAGTTTCTACCAGGAGCCTCCTCCTCCTAGGGTGGAATTAAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTCGGAAGAGTTCAACATATTCAGAGCCAGAAGCGGACACTAGCAGCAGCGTTCGACTAGGTCGTTTAAGTCTGGACGAGAAAGTATCTCAGAGTAAACCCACCAAGGGAGTTATTCCTGCCCATCAAAAGAAGCCACTGAGAAAATCTCTTCCTCCTAGACTTACTTCTGAAAAGATCAGTTCATCCAATTCAGCAACCTCACCGACTTCATCTGAGGCAGTCGGTGATGAAAAGACCTCCTTATCTAAAGTTACCCCCTTGTCCAACACAACAGAGGAAGAGAAAGTTGAGATGGATGCAGCCATTGAAGAGAACAATACTTTGTCCAATGAGACAACCTCCGACAAGCCAAGTGAAGCAGAATCTCATATGAATGGTGATATAGTCATTGAAAACAAACCAGACATCACCTCGGTCCTAGAACCCATAGCAGCAGAACATTAA 1386 0.4343 MMDPSNLSPANGLEAIHQNGVHEESSNSGKDVVSNSVDPSVNEIAETVALNGNIENFDQSDSTVSSNSYTAAIKGGSIDTVDGNNGTIPKEEEVKIMDQKVQSRAQKGHVKNKTVKPPSPRGTSSSLVKKSKDGKCEEASPAVPNGTSALGSNPRQPIKNKSFNDKQTQPKPAKPDAASSEAPMEKTKPSSLKKGLPDNVKGKEESSTPTAQDAKPRMVGVRPNYGFRFKCDERAERRKQFYTQLEEKIHAKEVEESTLQAKTKETQEAEIKMLRKTLAFKATPMPSFYQEPPPPRVELKKIPTTRAKSPKLGRRKSSTYSEPEADTSSSVRLGRLSLDEKVSQSKPTKGVIPAHQKKPLRKSLPPRLTSEKISSSNSATSPTSSEAVGDEKTSLSKVTPLSNTTEEEKVEMDAAIEENNTLSNETTSDKPSEAESHMNGDIVIENKPDITSVLEPIAAEH* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1032 461 Coils Coil 242 262 - -
Lan15g1032 461 MobiDBLite consensus disorder prediction 98 221 - -
Lan15g1032 461 PANTHER PROTEIN WVD2-LIKE 4 2 450 IPR044833 GO:0008017
Lan15g1032 461 Coils Coil 405 425 - -
Lan15g1032 461 MobiDBLite consensus disorder prediction 145 169 - -
Lan15g1032 461 Pfam Targeting protein for Xklp2 (TPX2) domain 227 298 IPR027329 -
Lan15g1032 461 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 450 - -
Lan15g1032 461 MobiDBLite consensus disorder prediction 368 403 - -
Lan15g1032 461 MobiDBLite consensus disorder prediction 20 39 - -
Lan15g1032 461 MobiDBLite consensus disorder prediction 1 39 - -
Lan15g1032 461 MobiDBLite consensus disorder prediction 187 201 - -
Lan15g1032 461 MobiDBLite consensus disorder prediction 282 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1032 Lan-Chr15 19408430 19413326 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1032 - - gmx:100804879 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1032 15 19408430 19413326 Lan14g0809 14 14926731 14931406 LSH
Lan15g1032 15 19408430 19413326 Lan3g1076 3 23080516 23085282 LSH
Lan6g1774 6 29010198 29013517 Lan15g1032 15 19408430 19413326 PCT
Lan3g1712 3 29659513 29663197 Lan15g1032 15 19408430 19413326 PCT
Lan15g1032 15 19408430 19413326 Lan6g1774 6 29010198 29013517 PCT
Lan15g1032 15 19408430 19413326 Lan3g1712 3 29659513 29663197 PCT