LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan14g0809	ATGATGGATCCGAGTAATCTTTCGCCTGCTGATGGGCTTGAAGCAATCCACCAAAATGGTGTTCATGAAGAATCATCAAATTCTGGAAATGATGTTGTTTCAAACAATGTAGACCTCAGTGTTACTGAAATTGTAGAAACTGTAGCTCTAAATGGAAATCTTGAAAATTTTGACAAGTCGGATAGTACTGTAACCGATAACTCGTCTATGGGAGCAACCAAAGAAGGATCAAATGATACCATTTTTGGAAACAATGCCACCATTTCTAAGGAAGAGGAAGTCAAAATCATAGATCAAACAGTGCAATCAAGAGCACAAAAGGGTCCTATCAAGAACAAGATTGTAAAGACCCCGAGTACCAGGGTTATTAATTCAAGTTTGGTAAAGAAGAGCAAAGATGGAAAAGGGGGAGAGGCACCACCTGCTGTTTCAAATCGTACTCTGGCTTTAGACTCTAACCCAAGACAGCCGATTAAAAACGGATCATTCAATGACAAGCGGACTCAAAACAAGCACCCCGGAAAACCTGATGCAGCATCTTCTAAAGCACCCAAGGAGAAGACCGGACCAAGATCGTTGAAGAAAGGGCCGCCACCTGATAATGTTCAAGGAGATGCAGACTCTTCTTCTTCTACTGCAGAAGATGCCAAACCTCGCAAGGTGGGGGCACTTCCAAATTATGGATTCAGTTTCAAGTGTGACGAGCGAGCTGCGAGAAGAAAGCAGTTCTATACGGAGCTTGAGGAGAAGATTCATGCAAAGGAAGTGGAGGAGAGTAACCTGCAAGCAAAAACCAAGGAGTCACAAGAAGCCGAGATTAAAAGGCTTAGGAAGAATCTAGCATTTAAAGCAACTCCAATGCCGACTTTCTACCACGAGCCTCCTCCTAGGGTGGAGTTAAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGTAGGAAGAGTTCAACATCTGCAGAGTCAGAAGGAAACACTAGCAGCAGTGCTCGACTAAATCGTTTAAGCCTAGATGAGAAAGTGTCTCAAAGTAAACCCGCTAAGGCAGTTACTCCTGTCCATCAAAGAAAGCCACAGCGAAAATCTCTTCCTCCACGACTTAATTCTGAAAGGATCCATTCATCAGATTCAGCAATTGCACCAACTTCATCTAAGGCAGTGGATGAGGAAAAGACATCCTTATCTAAAGCTACCCCCTTGTCCAATGCAACAGAGGACGAGAAAGTTGAGATCGCTGTAGGCAACAAAGAGAACAATGCTTTGTCCAATGAGACAACCTCAGACAAGCCAAGTGAAGCAGAATCTTATGTGAATGGTGACATAGTCATTGAAGAGAAACCCGATATCGTGTTGGTACCAGAACCTATAGCGGCAGAACATTAA	1389	0.4334	MMDPSNLSPADGLEAIHQNGVHEESSNSGNDVVSNNVDLSVTEIVETVALNGNLENFDKSDSTVTDNSSMGATKEGSNDTIFGNNATISKEEEVKIIDQTVQSRAQKGPIKNKIVKTPSTRVINSSLVKKSKDGKGGEAPPAVSNRTLALDSNPRQPIKNGSFNDKRTQNKHPGKPDAASSKAPKEKTGPRSLKKGPPPDNVQGDADSSSSTAEDAKPRKVGALPNYGFSFKCDERAARRKQFYTELEEKIHAKEVEESNLQAKTKESQEAEIKRLRKNLAFKATPMPTFYHEPPPRVELKKIPTTRAKSPKLGRRKSSTSAESEGNTSSSARLNRLSLDEKVSQSKPAKAVTPVHQRKPQRKSLPPRLNSERIHSSDSAIAPTSSKAVDEEKTSLSKATPLSNATEDEKVEIAVGNKENNALSNETTSDKPSEAESYVNGDIVIEEKPDIVLVPEPIAAEH*	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	315	342	-	-
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	370	404	-	-
	Lan14g0809	462	PANTHER	PROTEIN WVD2-LIKE 4	2	451	IPR044833	GO:0008017
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	20	34	-	-
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	146	164	-	-
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	59	83	-	-
	Lan14g0809	462	Pfam	Targeting protein for Xklp2 (TPX2) domain	229	299	IPR027329	-
	Lan14g0809	462	Coils	Coil	244	274	-	-
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	418	435	-	-
	Lan14g0809	462	PANTHER	PROTEIN WVD2-LIKE 5-RELATED	2	451	-	-
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	165	193	-	-
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	286	436	-	-
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	123	229	-	-
	Lan14g0809	462	MobiDBLite	consensus disorder prediction	1	34	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan14g0809	Lan-Chr14	14926731	14931406	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan14g0809	-		-	gsj:114408962	565.459

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan15g1032	15	19408430	19413326	Lan14g0809	14	14926731	14931406	LSH
	Lan14g0809	14	14926731	14931406	Lan3g1076	3	23080516	23085282	LSH
	Lan6g1774	6	29010198	29013517	Lan14g0809	14	14926731	14931406	PCT
	Lan3g1712	3	29659513	29663197	Lan14g0809	14	14926731	14931406	PCT
	Lan14g0809	14	14926731	14931406	Lan6g1774	6	29010198	29013517	PCT
	Lan14g0809	14	14926731	14931406	Lan3g1712	3	29659513	29663197	PCT