Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g1712 ATGATGGATACAAGTACTCTTTCACCCGTTGTTGATGGCCTCGAAGTGGTTCACCGAAATAGTGTTCACCAGGACCCTTCTAATTCTGGAGAAGATAGCGTTGTTTTGAATGATTTAGACATCAATGTTATTGAAAGTACAGAAATTGTAGCTTCAAATGCCAATTTTGAAACTCGGAACTCATCCGTGGCAGTAATTGAAGTCTCCGATAGCAACAATGTGAACCTTTCTAAGGAAGAGGAAGTGAAAATCACAAATCAAACAGGACAATTAAAAGCATCTAAGGGTCCTATTAAGAATAAGAGTGCAAAGACCACTACTTCCAGTGTTGTTCATGCAAGTTTGGTGAAAAGGAACAAAAATGCTAAAGATAAAGAGACATCATCTGCTGTTTCAATTGGTACATCGGCTTTAGATTCTCACACAAGACAGCCTATTAAAAACAAATCATTCAATGGTCGCCAGACTCAATTGGTCAAGCACCCTTCAAATTCCGATGCAGCGTCTTCTGAAGTAGCTACGGAGAAGACGGAACCAAAATCATTGAAAAAAGGAGCTGTTGATAAAGTTCAAGGAGAATCAGAATTGTCTCCTACTAATGCAGAAGACGCGAAACCTCGCAAGGTGGGAACACTTCCAAATTATGGATTCAGTTTCAGGTGTGGTGAAAGAGCTGAGAGAAGAAGAGAGTTCTACAGTAAAGTTGAGGAAAAGATTCATGCAAAGGAGATGGAAAAGAGTAACTTGCAAGCAAAATCCAAGGAGTCACAAGAAGCCGAGATGAAGATGCTTCGGAAGAGTCTAACATTTAAAGCAACTCCTTTGCCAACTTTCTATCAGGAGCCTCCTCCTAAGGTGGAGCTTAAGAAGATACCGACTACAAGACCTAAATCTCCCAAGCTTGGTCGCAAGAAGAGTTCAATCAATTCTGAGTCGGATGGAAACACTAGCAGCAGTTCTAAACAAGGTCGTTTAACTTTCAACGAGAAAATGTCTCAGGGCAATAATCCTCCTACTAAAGGAGTTACTCTTGTCCATCCAACGAAGCCACTACGAAGATCTCTTCCGGCTCAACTTGCTACTAGGAGGCTCAATTCATCAAATTCAAAGACTGTGCCCGCTTCATCTGAAGCAAGGAAGGTTGAAAAGACCGTATCTAGTGCGACAAAAAAAAATGTCAAGTCATCCAATGCTACAAAGGAACAGAAAATTGCAATACCAGCAACCAATGAAGAGGATAGTACCTTGCCTAGCGAGACAACTGAGGCTCTGCCCCTGAATGTGGTTGATTCAGACAAGCCGAGTGAAGCGCAGTCTCTTTTGAACGGTGATCTAGTGGTTGAAAAGAATCCTCAGCTTGCCTTTGCTCAAGAACCTATAACAGCAAAACATTAA 1395 0.4151 MMDTSTLSPVVDGLEVVHRNSVHQDPSNSGEDSVVLNDLDINVIESTEIVASNANFETRNSSVAVIEVSDSNNVNLSKEEEVKITNQTGQLKASKGPIKNKSAKTTTSSVVHASLVKRNKNAKDKETSSAVSIGTSALDSHTRQPIKNKSFNGRQTQLVKHPSNSDAASSEVATEKTEPKSLKKGAVDKVQGESELSPTNAEDAKPRKVGTLPNYGFSFRCGERAERRREFYSKVEEKIHAKEMEKSNLQAKSKESQEAEMKMLRKSLTFKATPLPTFYQEPPPKVELKKIPTTRPKSPKLGRKKSSINSESDGNTSSSSKQGRLTFNEKMSQGNNPPTKGVTLVHPTKPLRRSLPAQLATRRLNSSNSKTVPASSEARKVEKTVSSATKKNVKSSNATKEQKIAIPATNEEDSTLPSETTEALPLNVVDSDKPSEAQSLLNGDLVVEKNPQLAFAQEPITAKH* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g1712 464 Coils Coil 232 252 - -
Lan3g1712 464 MobiDBLite consensus disorder prediction 388 425 - -
Lan3g1712 464 MobiDBLite consensus disorder prediction 126 175 - -
Lan3g1712 464 MobiDBLite consensus disorder prediction 359 375 - -
Lan3g1712 464 MobiDBLite consensus disorder prediction 274 436 - -
Lan3g1712 464 MobiDBLite consensus disorder prediction 116 211 - -
Lan3g1712 464 PANTHER PROTEIN WVD2-LIKE 4 2 454 IPR044833 GO:0008017
Lan3g1712 464 Pfam Targeting protein for Xklp2 (TPX2) domain 217 286 IPR027329 -
Lan3g1712 464 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 454 - -
Lan3g1712 464 MobiDBLite consensus disorder prediction 176 190 - -
Lan3g1712 464 MobiDBLite consensus disorder prediction 303 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g1712 Lan-Chr3 29659513 29663197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g1712 - - gmx:100786958 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1774 6 29010198 29013517 Lan3g1712 3 29659513 29663197 LSH
Lan3g1712 3 29659513 29663197 Lan15g1032 15 19408430 19413326 PCT
Lan3g1712 3 29659513 29663197 Lan14g0809 14 14926731 14931406 PCT
Lan3g1712 3 29659513 29663197 Lan3g1076 3 23080516 23085282 PCT
Lan15g1032 15 19408430 19413326 Lan3g1712 3 29659513 29663197 PCT
Lan14g0809 14 14926731 14931406 Lan3g1712 3 29659513 29663197 PCT
Lan3g1076 3 23080516 23085282 Lan3g1712 3 29659513 29663197 PCT