Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0623 ATGGCTTCAGTTTGTGCACTCAAATTCTTGTTGTGGTTACTTCTATGGCACTGGAACTTTCTACCTCTTTGTCTAGGTAATCAAAAGTATGAAGATGAGTATCCATTTATCAAAAGTTCAAGCACATTCCAATCTCCACCATCAATTTCAACAACCTCAACCAACAATGTCTATGACTACATAATAGTGGGAGGTGGAACAGCTGGGTGCCCTTTAGCTGCAACACTCTCTCAAAATTTCAGTGTTCTATTACTTGAAAGAGGGGGTGTTCCTTTCACAAACTCCAATGTCACATTCCTAAGGAACTTTCACATTTCCTTAGCAGATACTTCACCAAATTCAGCTTCTCAGTATTTCTGTTCAACAGATGGAGTTCATAATGCTAGGGCAAGGATTTTGGGTGGTGGAAGTTCTATCAATGCTGGTTTCTATACTAGAGCAAGTCCAAGGTTTATGGAGAAGGTAGGGTGGGATGCCAAGCTAGTAAATCAGTCTTACACATGGGTTGAGAAGAGAATTGTTCATAGGCCAAAGTTTTCACCCTATCAGGCTGCAGTGAGGGACAGTCTTCTAGATTCGGGTGTCTCTCCTTTTAATGGATTCACCTATGATCATATCTATGGAACAAAAGTTGGCGGAACTATTTTTGACAGGTTCGGCCGCCGCCACACAGCCGCCGAACTCCTTGCTTCAGGGAACCCTGACAAACTTACTGTTTTGGTCTATGCCACGGTCCAAAAGATCGTTTTCGATGATAAAGGAAAAATACCAAAAGCTATTGCTGTTATTTTCAAGGATGAAAATGGGAGACAACATGAGGCAATTCTGAGAAATGATAAGCATAGTGAAGTAATACTATCTAGTGGGGCAATTGGGTCTCCTCAACTGTTATTACTTAGTGGAATTGGTTCAAAATCAGAACTCCAAAAATTGAACATAACATTGGTTCTTGATAACCCATATGTTGGGAAAGGAATGGTAGATAACCCAATGAACACAATTTTTGTGCCTTCTAATAGGCCAGTTCATCAATCACTCATACAAACAGTGGGTATTACCAAGTTGGGTGTGTATATTGAAGCTAGCAGTGGGTTTAGTCAGTCCAATGATAGCATTCATTGCAACCATGGCATGTTGTCAGCTGAGATTGGACAGATCTCAACAATTCCTCCTAAACAAAGATCAAAAGAAACTATTCAAGCTTTCCTACAGAACAAGCGCGACATTCCGATCGAAGCATTCAAGGGAGGCTTTATCCTGTCAAAAGTTGCTAGTGCTTGGTCAGCAGGCAAGCTAAGGTTGAACAACACCAATGTGGAGGACAATCCTATTGTTACCTTCAACTACTTCACCCACCCGTACGATCTTCAGCGATGCGTCGAAGGGATTCGCCTTGCAACGAAGGTTGTCCAGTCACAACACTTCACAAACTATACCTTGTGTGACAAGAAAACAACAGAGAAACTGCTTAGCCTTAGTGTTAAGGCTAATGTCAACCTCATACCTAAGCATCCTAATGATACAAAGTCACTAGAGCAGTTCTGTAGGGACACTGTGATTACAATTTGGCACTACCATGGTGGATGCCATGTGGGTAAGGTAGTGAACAATGAGTACAAGGTTCTTGGTGTTGATAGACTCCGCGTCGTAGATGGCTCGACATTTCCCGAGTCACCTGGAACCAATCCTCAAGCAACTGTGATGATGATGGGAAGGTACATGGGATTGAAGATTTTGAGAGAAAGAATAGGAAAATGA 1758 0.4192 MASVCALKFLLWLLLWHWNFLPLCLGNQKYEDEYPFIKSSSTFQSPPSISTTSTNNVYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFTNSNVTFLRNFHISLADTSPNSASQYFCSTDGVHNARARILGGGSSINAGFYTRASPRFMEKVGWDAKLVNQSYTWVEKRIVHRPKFSPYQAAVRDSLLDSGVSPFNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLASGNPDKLTVLVYATVQKIVFDDKGKIPKAIAVIFKDENGRQHEAILRNDKHSEVILSSGAIGSPQLLLLSGIGSKSELQKLNITLVLDNPYVGKGMVDNPMNTIFVPSNRPVHQSLIQTVGITKLGVYIEASSGFSQSNDSIHCNHGMLSAEIGQISTIPPKQRSKETIQAFLQNKRDIPIEAFKGGFILSKVASAWSAGKLRLNNTNVEDNPIVTFNYFTHPYDLQRCVEGIRLATKVVQSQHFTNYTLCDKKTTEKLLSLSVKANVNLIPKHPNDTKSLEQFCRDTVITIWHYHGGCHVGKVVNNEYKVLGVDRLRVVDGSTFPESPGTNPQATVMMMGRYMGLKILRERIGK* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0623 585 ProSitePatterns GMC oxidoreductases signature 2. 289 303 IPR000172 GO:0016614|GO:0050660
Lan5g0623 585 PANTHER OSJNBA0019K04.7 PROTEIN 2 585 - -
Lan5g0623 585 Pfam GMC oxidoreductase 58 330 IPR000172 GO:0016614|GO:0050660
Lan5g0623 585 Gene3D - 175 521 - -
Lan5g0623 585 SUPERFAMILY FAD/NAD(P)-binding domain 53 581 IPR036188 -
Lan5g0623 585 Pfam GMC oxidoreductase 428 572 IPR007867 GO:0016614
Lan5g0623 585 SUPERFAMILY FAD-linked reductases, C-terminal domain 326 528 - -
Lan5g0623 585 ProSitePatterns GMC oxidoreductases signature 1. 130 153 IPR000172 GO:0016614|GO:0050660
Lan5g0623 585 PIRSF Alcohol_oxidase 36 585 IPR012132 GO:0050660
Lan5g0623 585 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 585 - -
Lan5g0623 585 Gene3D - 58 571 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0623 Lan-Chr5 12776119 12784046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0623 58 582 Miscellaneous Gene Families AT5G51950 53.296 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0623 K15403 - gmx:100779461 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0623 5 12776119 12784046 Lan2g0402 2 4067400 4074831 LSH
Lan6g2140 6 31865228 31878505 Lan5g0623 5 12776119 12784046 PCT
Lan3g0227 3 1479641 1486226 Lan5g0623 5 12776119 12784046 PCT
Lan5g0623 5 12776119 12784046 Lan6g2140 6 31865228 31878505 PCT
Lan5g0623 5 12776119 12784046 Lan3g0227 3 1479641 1486226 PCT