Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0227 ATGGCTTCAGTTTGTGCAATCAATTTCTTTCTGTGCTTACTTCTATGGCTCTTCAACTTTCTACCTCTTTCTCAAGGTAATGAACATCACTATCCATTTATCAAAAAAGCAAGCACATTCTCATCTTCACCATCAGATTCAACAAGCACAACCAACAATGGCTATGAGTACATAATAGTGGGAGGTGGCACAGCAGGGTGCCCATTGGCTGCAACACTTTCTCAGAATTTCAGTGTTCTTCTTCTTGAAAGAGGAGGAATCCCTTTCACTAACCCTAATGTTTCATTTCTAGAAAACTTTCACATAACCTTGGCTGATACTTCACCTACTTCAGCTTCACAATACTTTATCTCAACTGATGGAGTTCTCAATGCAAGGGCAAGGATTTTGGGTGGTGGAACTTCCATTAATGCTGGCTTCTACACTAGAGCAAGTACAAGATATATAGAGAATGTTGGATGGGATTCCAAGCTAGTAAACGAGTCATATCCATGGGTTGAAAAGCAGATTGTTCATCGTCCAAAGTTTTCAGCTTGGCAAAGAGCAGCAAGGGACAGTCTTCTAGATGCTGGTGTATCACCTTTTAATGGCTTCACTTATGATCATAAATATGGTACCAAGGTTGGTGGAACCATTTTTGACAGATTTGGCCGCCGCCACACTTCTGCTGAACTTCTTTCTCAGGGAAACAGTGACAAACTTACTGTTTTGATTCATGCCACTGTCCAAAAGATTGTTTTTGATACAACAGGAAAAAGACCAAAAGCTATAGGGGTTATTTTCAAGGATGAAAATGGGAAACAACATCAAGCAATGCTGGGAAGTGATAGACACAGTGAAGTGATTGTGTCTAGTGGGGCAATTGGGACTCCTCAATTGCTATTGTTAAGTGGAATTGGCCCAAAACCAGAACTTGAAAACTTGAACATCACTGTGGTGCTTGACAACAAATTTATTGGAAAAGGCATGGCTGATAATCCCATGAACACAATTTTTGTTCCTTCTAAGAGACCAATTCAGCAGACACTCATAGAAACTGTTGGTATCACCAAATTGGGTGTGTACATTGAGACTAGCTGTGGGTTTGGTCAGTCCAACAATAGCATTCACTGCCACCATGGTCTCTTATCAGCTGAGATTGGACAGCTTTCCACAATTCCTCCCAAACAAAGATCAAGAGAATCCGTTGAAGCATTCATCAAGAACAAGAAAGACATACCAATTGAAGCATTCAGAGGAGGTTTCATCTTATCAAAAGTTGCAAATCCTTGGTCAACAGGTGAACTCAAATTGATCAACACCAACGTGGATGACAACCCTGCTGTTACATTCAACTACTTCAATCATCCATATGATGTTCAACGATGTGTTGAAGGGATTCGCTTAGCTACTAAGGTTGTTCAGTCACAACACTTCACAAACTACACTATGTGTGATAGACAAACTACTGAGGAATTGCTTAACCTTACTGTGAAAGCTAATGTTAACCTCATACCTAAGCATCTCAATGACACAAAGTCACTAGAGCAGTTTTGTAAGGACACTGTGATCACAATTTGGCACTATCATGGTGGGTGCCATGTTGGGAAGGTAATCAACGCGGACTACAAGGTTCTTGGTGTTGATAGACTCAGTGTGGTTGATGGCTCAACGTTTACTGAGTCACCAGGAACTAATCCTCAAGCTACTGTCATGATGTTGGGAAGGTACATGGGAGTGAAGATTTTAAGAGAGAGGTTGGGAAAATTGGCTGGTATATAA 1761 0.4083 MASVCAINFFLCLLLWLFNFLPLSQGNEHHYPFIKKASTFSSSPSDSTSTTNNGYEYIIVGGGTAGCPLAATLSQNFSVLLLERGGIPFTNPNVSFLENFHITLADTSPTSASQYFISTDGVLNARARILGGGTSINAGFYTRASTRYIENVGWDSKLVNESYPWVEKQIVHRPKFSAWQRAARDSLLDAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTSAELLSQGNSDKLTVLIHATVQKIVFDTTGKRPKAIGVIFKDENGKQHQAMLGSDRHSEVIVSSGAIGTPQLLLLSGIGPKPELENLNITVVLDNKFIGKGMADNPMNTIFVPSKRPIQQTLIETVGITKLGVYIETSCGFGQSNNSIHCHHGLLSAEIGQLSTIPPKQRSRESVEAFIKNKKDIPIEAFRGGFILSKVANPWSTGELKLINTNVDDNPAVTFNYFNHPYDVQRCVEGIRLATKVVQSQHFTNYTMCDRQTTEELLNLTVKANVNLIPKHLNDTKSLEQFCKDTVITIWHYHGGCHVGKVINADYKVLGVDRLSVVDGSTFTESPGTNPQATVMMLGRYMGVKILRERLGKLAGI* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0227 586 ProSitePatterns GMC oxidoreductases signature 1. 127 150 IPR000172 GO:0016614|GO:0050660
Lan3g0227 586 SUPERFAMILY FAD/NAD(P)-binding domain 48 578 IPR036188 -
Lan3g0227 586 Gene3D - 55 568 IPR036188 -
Lan3g0227 586 ProSitePatterns GMC oxidoreductases signature 2. 286 300 IPR000172 GO:0016614|GO:0050660
Lan3g0227 586 Gene3D - 172 518 - -
Lan3g0227 586 Pfam GMC oxidoreductase 423 569 IPR007867 GO:0016614
Lan3g0227 586 SUPERFAMILY FAD-linked reductases, C-terminal domain 323 525 - -
Lan3g0227 586 PANTHER OSJNBA0019K04.7 PROTEIN 2 586 - -
Lan3g0227 586 PIRSF Alcohol_oxidase 32 585 IPR012132 GO:0050660
Lan3g0227 586 Pfam GMC oxidoreductase 55 327 IPR000172 GO:0016614|GO:0050660
Lan3g0227 586 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0227 Lan-Chr3 1479641 1486226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0227 14 579 Miscellaneous Gene Families AT5G51950 50.088 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0227 K15403 - gmx:100779461 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2140 6 31865228 31878505 Lan3g0227 3 1479641 1486226 LSH
Lan3g0227 3 1479641 1486226 Lan5g0623 5 12776119 12784046 PCT
Lan3g0227 3 1479641 1486226 Lan2g0402 2 4067400 4074831 PCT
Lan5g0623 5 12776119 12784046 Lan3g0227 3 1479641 1486226 PCT
Lan2g0402 2 4067400 4074831 Lan3g0227 3 1479641 1486226 PCT