Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0402 ATGGCTTCAGTTGGTGCACTCAAATTCTTGTTGTACTTAGTTCTATGGCTCTGCAACTTTCTACCTCAATGTCAAGGTAAGCAAAACAAGTATGAAAATAAAAAGTACCCATTTATAAAAAATGCTAGCTCATTCCAAATTCCACCATCAATATCAACAAGCTCAACCAACAATGCATATGATTATATAATAGTAGGAGGTGGAACTGCAGGGTGCCCTTTAGCTGCAACACTTTCTAAGAATTTCAGTGTCCTATTACTTGAAAGAGGAGGTGTTCCTTACACAAATTCCAATGTCACATTCCTAAGGAACTTCCACATTTCCTTAGCAGATACTTCACCAACTTCAGCTTCTCAATATTTCTGTTCAACTGATGGAGTACACAATGCAAGGGCAAGGATTTTGGGTGGTGGTAGTTCTATCAATGCTGGATTCTATACTAGAGCTAGCCAAAGGTTTATAGAGAAGGTAGGGTGGGATGCTAATCTAGTAAATGAGTCATACCAATGGATTGAGAAGAGAATTGTTTACCATCCAAAGTTTTCACCATATCAGGATGCAGTGAAGGAGAGCCTTCTAGATTCCGGGGTGTCTCCATTCAATGGATTCACATATGATCATATCTATGGAACCAAAGTTGGTGGAACTATTTTTGACAGATTCGGCCGCCGCCACACAACCGCCGAACTCCTTGCTTCAGGGAACCCTGACAAACTTACTGTTTTGGTCTATGCCACTGTCCAAAAGATAGTTTTTGATCATAAAGGAGAAAAACCAAAAGCTGTTGGGGTTATATTCAAGGATGAAAATGGGAGACAACATGAGGCAATACTAGGAAATGATAGGCATAGTGAAGTGATAGTTTCTAGTGGTGCAATTGGGACACCTCAATTACTAATGCTTAGTGGAATTGGGCCAAAATCTGAACTCCAAAACTTGAACATAACAATGGTTCATGACAATCCATTTGTTGGAAAGGGAATGGTAGATAATCCAATGAACGCAGTTTTTGTGCCTTTTAATAGGCCAGTTAATCAGTCACTTATACAAACAGTGGGTATTACCAAGTTGGGTGTGTACATTGAGGCAAGCAGTGGGTTTAGCCAATCCAATGATAGCATTCACTGCCACCATGGTATGTTGTCAGCTGAGATTGGACAGCTCTCCACAATTCCTCCAAAGCAAAGATCAAAAGAAGCAATTCAAGCGTTTCGGGATAACAAGCGCGACATACCGATTGAAGCATTCAAGGGAGGCTTTATTTTGTCAAAAGTTGCAAGTGCTTGGTCAGCAGGCAAGCTCAGGCTGAACAACACCAATGTAGAGGACAATCCTATTGTTACCTTCAACTACTTCAGCCACCCTTACGATCTTCAGCGCTGTGTCGAAGGTATTCGACTTGCAACTAAGGTTGTACAGTCACAACATTTCACAAACTACACTTTGTCTGATAGAAAAACCACAGAGAAATTGCTTAACCTCAGTGTGAAGGCTAATGTAAACCTCATACCTAAGCATCCCAACGACACGGAGTCACTCGAGCAGTTCTGTAAGGACACCGTGATCACAATTTGGCATTACCATGGTGGGTGTCATGTGGGGAAGGTAGTCAGCAATGACTATATGGTTCTTGGTGTCGATAAACTCCGTGTTGTGGATGGATCAACGTTTACCGAGTCGCCAGGAACCAATCCTCAAGCAACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGAAACATTGGAGAAATTGGCTGGTGTATAA 1776 0.4167 MASVGALKFLLYLVLWLCNFLPQCQGKQNKYENKKYPFIKNASSFQIPPSISTSSTNNAYDYIIVGGGTAGCPLAATLSKNFSVLLLERGGVPYTNSNVTFLRNFHISLADTSPTSASQYFCSTDGVHNARARILGGGSSINAGFYTRASQRFIEKVGWDANLVNESYQWIEKRIVYHPKFSPYQDAVKESLLDSGVSPFNGFTYDHIYGTKVGGTIFDRFGRRHTTAELLASGNPDKLTVLVYATVQKIVFDHKGEKPKAVGVIFKDENGRQHEAILGNDRHSEVIVSSGAIGTPQLLMLSGIGPKSELQNLNITMVHDNPFVGKGMVDNPMNAVFVPFNRPVNQSLIQTVGITKLGVYIEASSGFSQSNDSIHCHHGMLSAEIGQLSTIPPKQRSKEAIQAFRDNKRDIPIEAFKGGFILSKVASAWSAGKLRLNNTNVEDNPIVTFNYFSHPYDLQRCVEGIRLATKVVQSQHFTNYTLSDRKTTEKLLNLSVKANVNLIPKHPNDTESLEQFCKDTVITIWHYHGGCHVGKVVSNDYMVLGVDKLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRETLEKLAGV* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0402 591 Pfam GMC oxidoreductase 430 574 IPR007867 GO:0016614
Lan2g0402 591 Pfam GMC oxidoreductase 60 332 IPR000172 GO:0016614|GO:0050660
Lan2g0402 591 SUPERFAMILY FAD-linked reductases, C-terminal domain 328 530 - -
Lan2g0402 591 ProSitePatterns GMC oxidoreductases signature 1. 132 155 IPR000172 GO:0016614|GO:0050660
Lan2g0402 591 ProSitePatterns GMC oxidoreductases signature 2. 291 305 IPR000172 GO:0016614|GO:0050660
Lan2g0402 591 Gene3D - 177 523 - -
Lan2g0402 591 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 591 - -
Lan2g0402 591 Gene3D - 60 573 IPR036188 -
Lan2g0402 591 PANTHER OSJNBA0019K04.7 PROTEIN 2 591 - -
Lan2g0402 591 PIRSF Alcohol_oxidase 38 589 IPR012132 GO:0050660
Lan2g0402 591 SUPERFAMILY FAD/NAD(P)-binding domain 56 583 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0402 Lan-Chr2 4067400 4074831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0402 14 583 Miscellaneous Gene Families AT5G51950 49.486 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0402 K15403 - gmx:100779461 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0623 5 12776119 12784046 Lan2g0402 2 4067400 4074831 LSH
Lan6g2140 6 31865228 31878505 Lan2g0402 2 4067400 4074831 PCT
Lan3g0227 3 1479641 1486226 Lan2g0402 2 4067400 4074831 PCT
Lan2g0402 2 4067400 4074831 Lan6g2140 6 31865228 31878505 PCT
Lan2g0402 2 4067400 4074831 Lan3g0227 3 1479641 1486226 PCT