Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0972 ATGGAAAACTCAGATGAAGACAATGAACTTCTATTCCCTCCAAACCCTCAAAACGACGACGATGATGAAGAAGGAAACGACGACGATGAAGAAGACGACGTCGTTTCACACTACCAGAACCATCGAAACCCTCAACCCTCACTATCGCAGTTACGCAAGCAGCATTTCAAGCTCGAAACGCTTACTCAGCGATTGTTATCGGAACTCGATCCAATTCGAGTCCACAACGTCTTAATAAACGGCAACACGAAGACCAAAGATTGGATCATTGAAGCTGAACTCAATGCGATCCATAACGCTACCACCGTTCAGGACTTGCTTCGTGCTTTGGAAATCGCACTGTCGAGGCTCCAGAGCCTCGAGGTTTTTGAATCCAGTAAGGTTCGACTTGAACCTGGGCCGCCGGAGTTGCCAAACACTACCAATGTCGTTATCGATGTCGTTGAGACTGTTAGCAAAGTCTCTGGTGAATTCGGCGTTTTTACTAAACTCGGGACTAGTTCTTGGACTGCTGAAGGTACTCTTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCTTCTGCAGCCTATGGTGCCAACCAAGCAACAGAGTTGAGTGTAGGGGTTTATGCCCCTCGACTTAAGGGATCTTTAACTCCTCTTGTAGCAAGACTATCCATTCTTTCCCAAGACTGGCAAGAGTTTTCTTCATACAAAGAGCAATTGTTGGGCATGTCTCTTGGCTTAATCTCAACAAAGCACCATGACTTGGCATACACTCTTGGGTGGCGTACCTTAACAGATCCATCACAAATGTCATCCAGGTCTATAAGGAGGCAACTTGGGCATGGTTTGCTGTCATCTTTGAAGTATACATATAAAGTTGACCGGAGAAACTCACCAATTAGGCCTACAAAAGGACATGCTTTTCTTTCTACCACTCACTTTGGTGGCCTTACACCAGATCATCGGAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGTTCGCTATGCTGTCCCGTTTGGGTTTTATAATACAGCACTGAACTTTGGGATTTCTGCTGGTGCTGTTTTCCCATGGGGGCGTGGTTTTATGGACAAGCCCTCTCCTCTCCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTAGGAGGTCCAATGAAATCGTGGGGATTTAAGACTAGGGAATTAGGTCCCACTGAACCACAAAGGAAAGGCAGAGATGGAATTTTTGACGGGTATGATGATTCCTCTAGATGGGACTCCATTGGAGGAGACCTTGCTGTTACTGCTTTTGCAGACCTCTCCTTTGATATTCCAATTAGGTGGTTGAGAGAGTATGGAATCCATGGGCATGTTTTTGCTGGTGCTGGGAATACCACTAAATTAACTCAGAATGAACATAAAAACTTCTCTCCTCGGAAGTTCTTAGACTCCTGTCAAACATCGGTGGGATGTGGATTTGTTATTCCTACTAGACTTTTCCGCCTAGAGGGTAACTACTATTACATACTCAAGCAGAATGGACATGATCATGGGAAAACTGGATTTAGGTTCGGCTTCTCGGCTCCTTCATAG 1578 0.4525 MENSDEDNELLFPPNPQNDDDDEEGNDDDEEDDVVSHYQNHRNPQPSLSQLRKQHFKLETLTQRLLSELDPIRVHNVLINGNTKTKDWIIEAELNAIHNATTVQDLLRALEIALSRLQSLEVFESSKVRLEPGPPELPNTTNVVIDVVETVSKVSGEFGVFTKLGTSSWTAEGTLKYKNLLGYGDLWDASAAYGANQATELSVGVYAPRLKGSLTPLVARLSILSQDWQEFSSYKEQLLGMSLGLISTKHHDLAYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTYKVDRRNSPIRPTKGHAFLSTTHFGGLTPDHRSLRFLRQEFDVRYAVPFGFYNTALNFGISAGAVFPWGRGFMDKPSPLPERFYLGGDFSPVCTLGGPMKSWGFKTRELGPTEPQRKGRDGIFDGYDDSSRWDSIGGDLAVTAFADLSFDIPIRWLREYGIHGHVFAGAGNTTKLTQNEHKNFSPRKFLDSCQTSVGCGFVIPTRLFRLEGNYYYILKQNGHDHGKTGFRFGFSAPS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0972 525 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 19 522 IPR039910 -
Lan3g0972 525 MobiDBLite consensus disorder prediction 16 33 - -
Lan3g0972 525 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 156 523 - -
Lan3g0972 525 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN ISOFORM 1 19 522 - -
Lan3g0972 525 Pfam Omp85 superfamily domain 179 522 IPR000184 GO:0019867
Lan3g0972 525 Gene3D membrane protein fhac 70 150 - -
Lan3g0972 525 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0972 Lan-Chr3 21419651 21424114 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0972 K07277 - gmx:100785408 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0104 15 723598 728505 Lan3g0972 3 21419651 21424114 LSH
Lan14g0162 14 2034312 2039729 Lan3g0972 3 21419651 21424114 LSH
Lan3g0972 3 21419651 21424114 Lan2g1153 2 22790086 22794567 PCT
Lan2g1153 2 22790086 22794567 Lan3g0972 3 21419651 21424114 PCT