Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1153 ATGGCAAACACAGTTGAAGAAAAAGAAGAATCAATTCAATCCCAATTTCCTCCAAACCCTAACAATGACACTCCATACTCCACCAATCACGAAGAATCCGAAGAAGAAGACGAAGATGAAGAAGAAGAAGAAGAAGATGAAGATGAATTCCAACCCCTGAATCCTCCAATACCCCAATCCCGAGAGTCCAAGCTTCGCGAGCAAAGATTAAAGGTGAAAGCCTTGTCCCAACGGTTATCATCGGAACCGGTTCCGATTCGAGTCCATGACGTCATCATCAAAGGCAACACTAAAACCAAGGATTGGGTAATAGAAGCGGAGTTGAAGGTATTAGAGACTGCCACCACAATGTTGGAGCTTATGAAAGCTTCTGAAATCGCCATGGCAAGGCTTCAGAGTCTCGAGATTTTCGATTCTTGTAAGGTTAAGCTCGAGGCTGGACCACCGGAGTTGCCTCACACTGCCAATGTCGTTGTCCATGTTGTGGAGACCGATAGTAAAGTTTCCGGTGAAGCAGGCGCTTATATGAAACCATCGGTTAGTTCTTGGACTACTGAAGGTTCTCTCAAGTATAAGAACTTGTTAGGTTATGCTGATATATGGGATGCTTCTTTGGCGTATGGTGCCAACCAAGCAACAGAGATGAGCGTAGGAGTGTATGCCCCTAGGCTTAAAGGGTTGTTAACTCCTCTAGTGGCACGTATATTCATGCTTTCCCAAGATTGGCAAGAGTTTTCTTCTTACAAACGGCAGTTGCTGGGTGCATCTCTTGGCTTGATCTCAACAAAGCACCATGATTTAGTATACACTCTTGGATGGCATATATTAACAGATCCGTCACAAATATCATCCAGGTCTATAAGGAGGCAGCTTGGTCATGGTTTACTGTCATCTTTGAAGTATACATTTAAAATTGACACGAGAAACTCACCTATCAGGCCAACAAAAGGGTATGCTTTTCTTTCTACCACTCATTTCGGTGGCCTTGCACCGGATCATCAGAGCTTGCGGTTTCTGCGTCAGGAGTTTGATGTTCGCTTTGCTGTACCCTTTGAGTTTTATAATACAGTGCTGAACCTTGGCATATCTGCTGGTGCTGTTTTTCCATGGGGGCGTGGGTTCTTAAATAAGCCATCACCCCTTCCAGAAAGGTTTTATTTGGGTGGTGATTTTTCTCCAGTTTGCACTCTAGGAGGACCAGCAACATTATGGGGATTTAAAACTAGGGGATTGGGACATACTGAACCAAGAAGGCAAAGTAGAGATGGAGCTAATGATGAAAATGGTGGTTCCTGTGGAAGAGACTTTATTGGTGGAGATCTTGCTGTTACAGCTTTTGCAGACCTTTCTTTTGATCTTCCAATTAAGTGGTTGAGAGAACATGGAATCCATGGGCATGTATTTGCTGGTGTTGGCAATACTGCTAAATTAACTGAGAATGAATACAAATATTTCTCCCCGGGGAAGTTTGTAGAGTCCTTTCGAACATCAGTGGGATGTGGAATTGTTATTCCTACGAGACTTTTCCGCCTAGAGGGTAACTACTACTCCGTGCTCAAGAAGGATGAGCATGATCATGGAAAGAGTGGATTTAGGTTCAGCTTCTCAGGTCCTTCGTAG 1620 0.4389 MANTVEEKEESIQSQFPPNPNNDTPYSTNHEESEEEDEDEEEEEEDEDEFQPLNPPIPQSRESKLREQRLKVKALSQRLSSEPVPIRVHDVIIKGNTKTKDWVIEAELKVLETATTMLELMKASEIAMARLQSLEIFDSCKVKLEAGPPELPHTANVVVHVVETDSKVSGEAGAYMKPSVSSWTTEGSLKYKNLLGYADIWDASLAYGANQATEMSVGVYAPRLKGLLTPLVARIFMLSQDWQEFSSYKRQLLGASLGLISTKHHDLVYTLGWHILTDPSQISSRSIRRQLGHGLLSSLKYTFKIDTRNSPIRPTKGYAFLSTTHFGGLAPDHQSLRFLRQEFDVRFAVPFEFYNTVLNLGISAGAVFPWGRGFLNKPSPLPERFYLGGDFSPVCTLGGPATLWGFKTRGLGHTEPRRQSRDGANDENGGSCGRDFIGGDLAVTAFADLSFDLPIKWLREHGIHGHVFAGVGNTAKLTENEYKYFSPGKFVESFRTSVGCGIVIPTRLFRLEGNYYSVLKKDEHDHGKSGFRFSFSGPS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1153 539 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 178 537 - -
Lan2g1153 539 Coils Coil 29 49 - -
Lan2g1153 539 MobiDBLite consensus disorder prediction 30 51 - -
Lan2g1153 539 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 18 537 IPR039910 -
Lan2g1153 539 Gene3D membrane protein fhac 85 164 - -
Lan2g1153 539 MobiDBLite consensus disorder prediction 1 27 - -
Lan2g1153 539 Pfam Omp85 superfamily domain 193 536 IPR000184 GO:0019867
Lan2g1153 539 MobiDBLite consensus disorder prediction 1 66 - -
Lan2g1153 539 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 18 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1153 Lan-Chr2 22790086 22794567 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1153 K07277 - gmx:100802876 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0104 15 723598 728505 Lan2g1153 2 22790086 22794567 PCT
Lan14g0162 14 2034312 2039729 Lan2g1153 2 22790086 22794567 PCT
Lan3g0972 3 21419651 21424114 Lan2g1153 2 22790086 22794567 PCT
Lan2g1153 2 22790086 22794567 Lan15g0104 15 723598 728505 PCT
Lan2g1153 2 22790086 22794567 Lan14g0162 14 2034312 2039729 PCT
Lan2g1153 2 22790086 22794567 Lan3g0972 3 21419651 21424114 PCT