Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0162 ATGGAAAACTCAGATGAAGAAAACGAACTTCCAAACCCTAACAACAACAACAACCACATCGAAGAAGAAATCGACGACGATGAATACGAAGATGAAGACGAAGACGAAGACGATGATGACAACGACGACGAAGACGACGACGTCGTTTCACACTTCCCGAACCCTCAATCTCCACTATCACAGTTACGCGAACAGCGATTCAAGCTCGAAACGCTTTCACGGCGGTTATCATCGGAACTCGTTCCAATCCGAGTCCACGATATTTTGATAAACGGCAACACGAAGACCAAAGATTGGATCATCGAAGCCGAACTCAAAGGAATCGAGAACGCAACCACCGTTCAGGAGTTGCTTCGTGCTTCGGAAATTGCACTCGCCAGGTTACAGAACCTTGGAATTTTCGAATCCAGTAAGGTTCGGCTTGAGCCTGGACCGCCGGAGTTGCCGAATACTACCAATGTCATCATTGATGTGGTTGAGGCTGTGAATAAAGTATCTGGTGAATTCGGCGTTTTCACGAAACCTGCGACTAGTTCTTGGACTGCTGAAGGTACTCTTAAGTACAAAAACTTTTTAGGTTATGGTGATCTATGGGATGCTTCTGTAGCCTATGGTGCCAACCAAGCGACAGAGTTGAGTGTAGGGGTGTATGCCCCTCGACTTAAGGGATCTTTAACTCCTCTTGTGGCAAGACTATCCATGCTTTCCCAAGACTGGCAAGAGTTTTCTTCGTACAAAGAGCAATTGTTGGGCTTGTCTCTTGGCTTAATCTCAACAAAACACCATGACTTAGCATACACCCTTGGATGGCGTACCTTAACAGATCCATCACAAATGTCATCTAGGTCTGTAAGGAGGCAGCTTGGGCATGGTTTACTGTCCTCTTTGAAGTATACGTATAAAGTTGATAGGCGAAACTCACCAATTAGGCCTACAAAAGGATATGCATTTGTTTCTACGACTAACTTTGGCGGCCTTGCACCAGATCAACGGGGCTTGCAGTTTCTGCGTCAGGAGTTTGATGTTCGGTATGCTGTTCCGTTTGGGTTTTATAATACAGCACTGAACCTTGGGATTTCTGCTGGTGCTGTTTTTCCATGGGGGCCTGGTTTTATGGATAGGCCATCTCCCCTTCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTAGGAGGGCCGATGACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTACTGAACAACGAAGGCAAAGCAGAGATGGAATTTCTAATGAGTATGATGATTCCTCTGGATGGGACTCCATTGGAGGAGATCTTGCTGTTACTGCTTTTGCAGACCTCTCTTTTGATCTTCCAATTCGGTGGTTGAGAGAACATGGAATCCATGGGCATGTTTTTGCTGGTGCTGGGAATACTGCTAAATTAACTCAGAATGAATATAAGCACTTCTCTCCTCAAAAGTTCTTAGATTCCTTTCGAACATCAGTGGGATGTGGATTTGTTATCCCTACTTCACTTTTCCGCCTAGAGGGTAATTTCTACTACATACTCAGGCAGGATGAACACGATCGTGGGAAAACTGGATTTAGGTTCAGCTTCTCAGCTCCTTCATAG 1611 0.4525 MENSDEENELPNPNNNNNHIEEEIDDDEYEDEDEDEDDDDNDDEDDDVVSHFPNPQSPLSQLREQRFKLETLSRRLSSELVPIRVHDILINGNTKTKDWIIEAELKGIENATTVQELLRASEIALARLQNLGIFESSKVRLEPGPPELPNTTNVIIDVVEAVNKVSGEFGVFTKPATSSWTAEGTLKYKNFLGYGDLWDASVAYGANQATELSVGVYAPRLKGSLTPLVARLSMLSQDWQEFSSYKEQLLGLSLGLISTKHHDLAYTLGWRTLTDPSQMSSRSVRRQLGHGLLSSLKYTYKVDRRNSPIRPTKGYAFVSTTNFGGLAPDQRGLQFLRQEFDVRYAVPFGFYNTALNLGISAGAVFPWGPGFMDRPSPLPERFYLGGDFSPVCTLGGPMTLWGFKTRGLGPTEQRRQSRDGISNEYDDSSGWDSIGGDLAVTAFADLSFDLPIRWLREHGIHGHVFAGAGNTAKLTQNEYKHFSPQKFLDSFRTSVGCGFVIPTSLFRLEGNFYYILRQDEHDRGKTGFRFSFSAPS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0162 536 Pfam Omp85 superfamily domain 190 533 IPR000184 GO:0019867
Lan14g0162 536 Gene3D membrane protein fhac 82 161 - -
Lan14g0162 536 Pfam Surface antigen variable number repeat 83 160 IPR010827 GO:0019867
Lan14g0162 536 ProSiteProfiles POTRA domain profile. 83 161 IPR034746 -
Lan14g0162 536 MobiDBLite consensus disorder prediction 1 63 - -
Lan14g0162 536 MobiDBLite consensus disorder prediction 405 425 - -
Lan14g0162 536 MobiDBLite consensus disorder prediction 21 47 - -
Lan14g0162 536 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 8 534 - -
Lan14g0162 536 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 176 534 - -
Lan14g0162 536 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 8 534 IPR039910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0162 Lan-Chr14 2034312 2039729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0162 K07277 - gmx:100785408 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0104 15 723598 728505 Lan14g0162 14 2034312 2039729 LSH
Lan14g0162 14 2034312 2039729 Lan3g0972 3 21419651 21424114 LSH
Lan14g0162 14 2034312 2039729 Lan2g1153 2 22790086 22794567 PCT
Lan2g1153 2 22790086 22794567 Lan14g0162 14 2034312 2039729 PCT