Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1323 ATGGCTACTACTGATCGTTTGACCCGAGTTCACAGTCTCCGTGAGAGGATTGATGAAACACTCAGTACTAACAGGAATGAAATTCTGACCCTTCTCTCAAGGATTGAAAGCAAGGGAAAGGGACTCCTACAACACCATCAAATCATTGCTGAGTTTGAAGAAATCCCTGAAGAGAATAGAAAGAAACTAAGTAATGGTCCCTTTGGTGAAGTTTTGAGATCTACACAGGAAGCCATAGTTTTACCACCATGGATTGCTTTGGCTGTTCGTCCAAGACCTGGTGTTTGGGAGTATCTGAAAGTGAATGTGCATGCTCTTGTTGCTGAGGAGTTGCAAGCTGCTGAGTATCTGAAATTCAAGGAGGAACTAGTTGATGGAAGTTCTAATGGTAACTTTGTGCTTGAGTTGGACTTTGAACCATTTAATGCATCGTTCCCTCGCCCAACTCTGAACAAGTCAATTGGAAATGGTGTTCAATTCCTCAACCGCCACTTGTCTGCGAAACTCTTCCATGACAAGGAGAGCTTGCTTCCACTTCTGGAATTCCTCAGATCTCACAGCTACAATGGAAAGACATTGATGCTGAATGACAGAATTCAGACACCAGATTCTCTTCAAAATGTTCTAAGGAAAGCTGAAGAGTATCTAAGCACACTTGCTCCTGAAACACCCTACTCAGCATTTGAACACAGATTCCAGGAGATTGGTTTGGAAAGGGGGTGGGGTGACACCGCCGAGCGTGTCCTTGAAATGATCCAACTTCTCTTGGATCTTCTTGAGGCACCGGACCCTTTCACCCTTGAGACATTCATTGGAAGAATCCCAATGGTCTTCAATGTTGTTATCCTTTCTCCCCATGGTTACTTTGCACAAGATAATGTCTTGGGATACCCCGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAGTGAGATGCTCAAGCGTATTAAGCAACAAGGCTTGGATATCGTCCCTCGTATTCTCATTATCACTCGTCTTCTCCCTGAGGCAGTAGGAACTACTTGTGGGCAACGTCTTGAGAAGGTATATGATACTGAACATTGCCACATTCTTCGAGTTCCCTTTAGAACTGAGAAGGGAATTGTTCGCAAATGGATCTCCAGATTCGAAGTATGGCCCTACCTAGAAACTTACACCGAGGATGTTGTCCAAGAACTTGCGAAGGAGTTGCAAGGCAAGCCAGATCTGATTGTTGGAAATTATAGCGATGGAAACATTGTTGCGTCTCTGTTGGCGCATAAGTTAGGTGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATATCCGGAATCTGACATTTACTGGAAAAAATTTGACGAGAAATATCACTTCTCGTCCCAATTTACAGCTGATCTCTTTGCAATGAACCACACAGACTTTATTATCACCAGTACCTTCCAAGAGATTGCTGGAAACAAGGATACTGTTGGACAGTATGAGAGTCACACTGCCTTCACCCTTCCTGGACTCTACCGTGTTGTACACGGTATCAATGTCTTTGACCCAAAGTTCAACATTGTCTCACCTGGCGCTGACCAGACCATTTACTTCCCGTATACCGAAACTAGCCGTAGGTTGACATCCTTCCACCCTGAGATTGAAGAGCTTCTTTACAGCTCAGTGGAGAATGAAGAGCACATATGTGTATTGAAGGACCGCAACAAGCCAATTATCTTCACCATGGCACGGTTGGACCGTGTGAAGAACATTACAGGACTTGTGGAGTGGTATGGTAAGAATGCTCGCCTCCGCGAGTTGGTGAACCTTGTGGTTGTGGCCGGAGATAGGAGGAAGGAGTCCAAGGACTTGGAAGAAAAAGCTGAGATGAAGAAAATGTATAGCCTGATCGAGACCTACAAGCTGAATGGCCAATTCAGATGGATTTCCTCTCAGATGAACAGAGTAAGGAATGGTGAGCTTTACCGTGTGATCTGTGACACAAAGGGTGCTTTTGTGCAGCCTGCTGTGTATGAAGCTTTTGGTTTGACCGTTGTTGAGGCCATGACTTGTGGTTTGCCAACTTTTGCTACTTGCAATGGCGGTCCTGCTGAGATCATTGTGCACGGAAAATCTGGATACCACATTGATCCTTATCATGGTGACCGTGCTGCTGATCTTCTTGTTGAATTCTTTGAGAAGTCTAAAGCAGATCCATCTCACTGGGACAAAATCTCCGGCGGAGGCCTGCAGCGTATTGAAGAGAAGTATACATGGCAAATTTACTCGGAGAGGCTTCTGACTCTCACTGGTGTCTATGGCTTCTGGAAGCATGTGTCTAACCTTGACCGACGTGAGAGTCGCCGCTACCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCAGTGCCCCTTGCTGTTGAAGAGTAA 2424 0.4534 MATTDRLTRVHSLRERIDETLSTNRNEILTLLSRIESKGKGLLQHHQIIAEFEEIPEENRKKLSNGPFGEVLRSTQEAIVLPPWIALAVRPRPGVWEYLKVNVHALVAEELQAAEYLKFKEELVDGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLLPLLEFLRSHSYNGKTLMLNDRIQTPDSLQNVLRKAEEYLSTLAPETPYSAFEHRFQEIGLERGWGDTAERVLEMIQLLLDLLEAPDPFTLETFIGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALESEMLKRIKQQGLDIVPRILIITRLLPEAVGTTCGQRLEKVYDTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVVQELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFDEKYHFSSQFTADLFAMNHTDFIITSTFQEIAGNKDTVGQYESHTAFTLPGLYRVVHGINVFDPKFNIVSPGADQTIYFPYTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDRAADLLVEFFEKSKADPSHWDKISGGGLQRIEEKYTWQIYSERLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVEE* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1323 807 ProSiteProfiles U-box domain profile. 1 27 IPR003613 GO:0004842|GO:0016567
Lan1g1323 807 Gene3D - 26 146 - -
Lan1g1323 807 Gene3D Glycogen Phosphorylase B; 281 797 - -
Lan1g1323 807 PANTHER - 4 806 IPR012820 GO:0005985|GO:0016157
Lan1g1323 807 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 296 764 - -
Lan1g1323 807 Pfam Sucrose synthase 9 554 IPR000368 GO:0005985|GO:0016157
Lan1g1323 807 Gene3D - 147 276 - -
Lan1g1323 807 PANTHER SUCROSE SYNTHASE 4 806 - -
Lan1g1323 807 TIGRFAM sucr_synth: sucrose synthase 25 803 IPR012820 GO:0005985|GO:0016157
Lan1g1323 807 Pfam Glycosyl transferases group 1 565 737 IPR001296 GO:0016757
Lan1g1323 807 Gene3D Glycogen Phosphorylase B; 528 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1323 Lan-Chr1 22933321 22938617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1323 1 807 Glycosyltransferase AT3G43190 83.416 0.0 1419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1323 K00695 - gmx:547508 1507.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0950 12 16367425 16372802 Lan1g1323 1 22933321 22938617 LSH
Lan1g1323 1 22933321 22938617 Lan1g0457 1 3773013 3780569 LSH
Lan1g1323 1 22933321 22938617 Lan15g0196 15 2125381 2130176 PCT
Lan1g1323 1 22933321 22938617 Lan14g0094 14 1260671 1266386 PCT
Lan15g0196 15 2125381 2130176 Lan1g1323 1 22933321 22938617 PCT
Lan14g0094 14 1260671 1266386 Lan1g1323 1 22933321 22938617 PCT