Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0457 ATGGCTACTGATCGATTGACCCGAGTTCACAGTCTCCGCGAAAGGATTGATGAAACCCTCAGTATTAACAGGAATGAAATTCTGTCTCTTCTCGCAAGGGTTGAAGGCAAGGGCAAGGGACTCCTGCAACACCATCAGATCATTGCTGAGTTTGAAGAAATTCCTAAGGAGAATAGGCAGAAGCTAAGTGATGGTCCCTTTGGTGAAGTTTTGAGATCCACACAGGAAGCTATAGTTTTATCACCATGGGTTGCTTTGGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTACCTGAAAGTGAATGTGCATGCTCTTGTTGTTGAGGAGTTGCAAGCTGCTGAGTACTTGAAATTCAAGGAGGAAATTGTTGATGGAAGTTCCAATGGTAACTTTGTGCTTGAATTGGACTTTGAACCATTTAATGCATCTTTCCCGCGCCCAACTCTGAACAAGTCAATTGGAAATGGTGTGCAATTCCTCAACCGCCACCTTTCTGCCAAACTCTTCCATGACAAGGAGAGCTTGCACCCTCTTCTGGAATTCCTCAGATCTCACAGCTACAATGGAAAGACACTGATGTTGAATGACAAAATTCAGACTCCAGATTCTCTTCAACATGTGCTCAGGAAAGCCGAGGAGTATCTTGGCACACTTGCTCCTGAAACACCCTACTCAGAATTTGAATACAAATTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGTGACACCGCCGAGCGTGTCCTTGAGATGATCCAACTTCTGTTGGACCTTCTTGAGTCACCTGACCCTTGCACACTCGAGTCATTCCTTGGAAGAATCCCTATGGTCTTCAATGTTGTTATCCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTAGGATACCCTGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGAATGAGATGCTCAAACGCATTAAGCAACAAGGCTTGGATATTGTCCCTCGCATTCTCATTATCACCCGTCTTCTCCCTGAGGCAGTAGGAACTACTTGTGGCCAACGTCTTGAGAAGGTATATGATACTGAACATTGCCACATTCTTCGAGTTCCATTTAGAACCGAGAAGGGAATTGTTCGCAAATGGATCTCCAGATTTGAAGTCTGGCCATACCTAGAAACTTTCACCGAGGATGTTGCCCATGAACTTGCCAAGGAGTTGCAAGGCAAGCCAGATCTGATTGTTGGAAACTATAGTGATGGAAACATTGTTGCCTCTTTGCTGGCACATAAATTAGGTGTAACTCAGTGTACAATTGCTCATGCACTCGAGAAGACCAAATATCCTGAATCTGACCTTTACTGGAAGAAATTTGATGAGAAGTATCACTTCTCCTCCCAATTTACAGCTGATCTTTTTGCAATGAACCACACAGACTTTATTATCACAAGTACCTTCCAAGAGATTGCTGGAAACAAGGATACTGTTGGACAGTACGAGAGTCACACTGCCTTCACCCTTCCTGGACTCTACCGTGTTGTGCATGGTATCAATGTTTTTGATCCAAAGTTCAACATTGTCTCTCCCGGAGCTGATCAAACCATTTACTTCCCATACACTGAAACTAGCCGTAGGTTGACATCCTTCCACCCGGAGATTGAAGAGCTTCTTTACAGCACAGTGGAGAATGAAGAGCACATATGTGTATTGAAGGACCGCAACAAGCCGATTATCTTCACCATGGCAAGGTTGGACCGTGTGAAAAACATCACAGGACTTGTTGAGTGGTATGGTAAGAATGCTCGCCTTCGGGAGTTGGTGAACCTTGTTGTTGTGGCTGGAGATAGGAGGAAGGAGTCCAAGGACCTGGAAGAGAAAGCTGAGATGAAGAAGATGTATGGCCTCATTGAGACATACAAGTTGAATGGACAATTCAGATGGATTTCTTCTCAGATGAATAGAATAAGGAATGGCGAGCTGTACCGTGTGATCTGTGACACGAAGGGTGCTTTTGTTCAGCCTGCTGTGTATGAAGCTTTTGGTTTGACTGTTGTTGAGGCCATGACTTGTGGTTTGCCAACCTTCGCTACTTCCAATGGTGGTCCAGCTGAGATAATTGTGCATGGCAAGAGTGGATACCACATTGACCCTTATCATGGTGACCGTGCTGCTGATCTTCTTGTTGAATTCTTTGAGAAGTCTAAGGCAGATCCATCTCTCTGGGACAAAATCTCCCAAGGAGGCCTGCAGCGTATTGAAGAGAAGTATACCTGGCAAATTTACTCCGAGAGGCTTCTAACTCTCACTGGTGTCTATGGCTTCTGGAAGCACGTGTCTAACCTTGACCGCCGTGAGAGTCGCCGCTACCTTGAAATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTGTTGAGGAGTAA 2421 0.4548 MATDRLTRVHSLRERIDETLSINRNEILSLLARVEGKGKGLLQHHQIIAEFEEIPKENRQKLSDGPFGEVLRSTQEAIVLSPWVALAVRPRPGVWEYLKVNVHALVVEELQAAEYLKFKEEIVDGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRSHSYNGKTLMLNDKIQTPDSLQHVLRKAEEYLGTLAPETPYSEFEYKFQEIGLERGWGDTAERVLEMIQLLLDLLESPDPCTLESFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLKRIKQQGLDIVPRILIITRLLPEAVGTTCGQRLEKVYDTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETFTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDLYWKKFDEKYHFSSQFTADLFAMNHTDFIITSTFQEIAGNKDTVGQYESHTAFTLPGLYRVVHGINVFDPKFNIVSPGADQTIYFPYTETSRRLTSFHPEIEELLYSTVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRIRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATSNGGPAEIIVHGKSGYHIDPYHGDRAADLLVEFFEKSKADPSLWDKISQGGLQRIEEKYTWQIYSERLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVEE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0457 806 Gene3D - 146 275 - -
Lan1g0457 806 Gene3D - 25 145 - -
Lan1g0457 806 PANTHER SUCROSE SYNTHASE 1 805 - -
Lan1g0457 806 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Lan1g0457 806 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Lan1g0457 806 Gene3D Glycogen Phosphorylase B; 280 796 - -
Lan1g0457 806 Pfam Glycosyl transferases group 1 564 729 IPR001296 GO:0016757
Lan1g0457 806 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Lan1g0457 806 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Lan1g0457 806 Gene3D Glycogen Phosphorylase B; 527 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0457 Lan-Chr1 3773013 3780569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0457 6 806 Glycosyltransferase AT3G43190 83.770 0.0 1414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0457 K00695 - gmx:547508 1518.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0457 1 3773013 3780569 Lan1g0457 1 3773013 3780569 ECH
Lan12g0950 12 16367425 16372802 Lan1g0457 1 3773013 3780569 LSH
Lan1g1323 1 22933321 22938617 Lan1g0457 1 3773013 3780569 LSH
Lan1g0457 1 3773013 3780569 Lan15g0196 15 2125381 2130176 PCT
Lan1g0457 1 3773013 3780569 Lan14g0094 14 1260671 1266386 PCT
Lan15g0196 15 2125381 2130176 Lan1g0457 1 3773013 3780569 PCT
Lan14g0094 14 1260671 1266386 Lan1g0457 1 3773013 3780569 PCT