Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0196 ATGACCACTAGTCACTTGACTTGTTCTCACTCTTTGAAGGAGAGGCTTGATGAAATTCTCACTGGTCAGATAAATGAAATTATAACCCTTCTATCAAGGGTTGAAGCCAAGGGTAAGGGAATCATACAAAATCCTCAACTCATTGCCGAGTTTGAAGAAATATCAAAAGAGAATAAGCAAAAATTAATTGATGGGGTCTATGGAGAAGTTTTGAGATCCATCCAAGAAGTTATAGTGTTGCCACCATATTTAGCTTTGGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTATCTGCAGGTTGATGTACACGAGGCTGTTGTTGATGAGTTGTGTGCTGCTGAGTATCTCAAGTTCAAGGAGGAACTTGTTGATGGAAGTTCTAATGGTAACATTGTGCTTGAGTTGGACTTTGAACCATTTAATGCATCATTTCCAAGACCAACTTTGAACAAATCAATTGGTAATGGTGTAGAGTTCCTTAATCGCCACCTTTCCGCTAAGCTCTTCCATGATAGGGAGAGCATGAAGCCACTGTTGGAATTCCTCAAGCTTCATAGCTACAAGGGAAAGACTCTGATGTTGAATGACAAAATTCGAGACCTAAATTATCTCCAATATGTCCTGAAAAAAGTTGAAGACTATCTCGTCACACTTACTCCCGAAACACCCTACTCGGAATTTGAGGTCAAACTTCAGGATATTGGTTTGGAGAGAGGGTGGGGTGACACTGTAGAGAGTGTCCTTGAGATGATTCAACTTCTCTTGGATCTTCATGAGGCACCTGACCCCTTCACCCTTGAGAAATTCCTTGGAAGGATCCCTATGGTTTTCAATGTTGTTATCCTTTCTCCTCATGGTTACTTTGCCCAAGATAATGTCTTGGGATACCCTGATACCGGAGGCCAGGTTGTTTACATCTTAGATCAAGTTCGTGCCTTAGAGATCGAGATGCTCAACCGCATCAAGAAACAAGGCTTGGATATCAAACCTCGTATTCTCATTATCACCCGTCTTCTACCTGATGCAGTAGGAACTACTTGTGGCGAACGTGTTGAAAAGGTATATGATACTGAACATTGCCACATTCTTCGAGTTCCTTTTAGAACAGAGGAGGGAATTGTTCGCAAATGGGTGTCAAGATTCGAAGTGTGGCCCTACCTAGAGACTTTCACCGAGGATGTTGCTCTTGAACTTGCCAATGAGTTGCAAGGCAAGCCTGATCTAATAGTTGGAAACTATAGTGATGGAAACATTGTTGCCTCTTTGTTAGCACATAAATTAGGTGTAACTCAGTGTACCATTGCTCATGCACTTGAAAAGACCAAATATCCTGAATCTGATGTTTACTGGGAAAAATTCGAAGACAAATATCACTTCTCCTGCCAATTTACTGCAGATCTTTTTGCAATGAACCACACAGACTTCATTATCACTAGTACTTTCCAAGAGATTGCTGGAAGCAAGGACACTGTTGGACAATATGAGAGTCACACTGCCTTCACCCTTCCTGGACTCTACCGTGTTGTTCACGGTATTGATGTCTTTGATCCAAAGTTCAACATTGTCTCTCCGGGAGCCGACATGAGCATTTACTTCCCCTACACTGAAACCAAGCGTAGGTTGACAAAGTTCCACCATGAGATTGAAGAGCTTCTTTACAGCTCAGTAGAGAATGAGGAGCACATATGTGTATTGAAGGATCGGAACAAGCCAATTATCTTCACAATGGCAAGGTTAGACCGTGTGAAGAACATTACAGGACTTGTTGAGTGGTATGGCAAGAATGCTCGCCTTCGTGAGCTTGTGAACCTTGTCGTTGTTGCTGGAGATAGGAGGAAGGAATCCAAAGACTTGGAAGAGAAAGCTGAAATGAAGAAGATGTATGGTCTAATTGAGACCTACAAGCTGAATGGCCAATTTAGATGGATTTCCTCTCAGATGAATAGGGTGAGGAATGGTGAGCTCTACCGCATAATTTGTGATATAAAAGGCGCTTTTGTGCAGCCTGCTGTTTATGAAGCTTTTGGTTTGACTGTGATTGAGGCTATGACTTGTGGATTGCCTACATTTGCTACCTGCAATGGTGGTCCCGCTGAGATCATTGTTCATGGAAAATCTGGATACCACATTGACCCCTACAATGGTGACCATGCTGCTGATCTCCTTGTTGAATTCTTCGAGAAGAGCAAGGAAGATCCTTCTCATTGGGACAAAATCTCCCAAGGTGGTCTCAAGCGAATTCATGAGAAGTATACATGGCAAATTTACTCTGAAAGGCTTCTGACTCTCACTAGTGTATATGGATTCTGGAAGCATGTGACTGACCTTGACCAACGTGAAAGAAAACGTTACCTTGAGATGTTCTATGCACTCAAATACCGCAAATTGGTATATATATCTTTTCTCATGACCTTTTGA 2418 0.4227 MTTSHLTCSHSLKERLDEILTGQINEIITLLSRVEAKGKGIIQNPQLIAEFEEISKENKQKLIDGVYGEVLRSIQEVIVLPPYLALAVRPRPGVWEYLQVDVHEAVVDELCAAEYLKFKEELVDGSSNGNIVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHDRESMKPLLEFLKLHSYKGKTLMLNDKIRDLNYLQYVLKKVEDYLVTLTPETPYSEFEVKLQDIGLERGWGDTVESVLEMIQLLLDLHEAPDPFTLEKFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLNRIKKQGLDIKPRILIITRLLPDAVGTTCGERVEKVYDTEHCHILRVPFRTEEGIVRKWVSRFEVWPYLETFTEDVALELANELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDVYWEKFEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTETKRRLTKFHHEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRIICDIKGAFVQPAVYEAFGLTVIEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYNGDHAADLLVEFFEKSKEDPSHWDKISQGGLKRIHEKYTWQIYSERLLTLTSVYGFWKHVTDLDQRERKRYLEMFYALKYRKLVYISFLMTF* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0196 805 Gene3D - 25 145 - -
Lan15g0196 805 PANTHER SUCROSE SYNTHASE 1 797 - -
Lan15g0196 805 Pfam Glycosyl transferases group 1 564 739 IPR001296 GO:0016757
Lan15g0196 805 Pfam Sucrose synthase 10 553 IPR000368 GO:0005985|GO:0016157
Lan15g0196 805 Gene3D - 146 275 - -
Lan15g0196 805 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Lan15g0196 805 TIGRFAM sucr_synth: sucrose synthase 25 796 IPR012820 GO:0005985|GO:0016157
Lan15g0196 805 Gene3D Glycogen Phosphorylase B; 527 753 - -
Lan15g0196 805 Gene3D Glycogen Phosphorylase B; 280 796 - -
Lan15g0196 805 PANTHER - 1 797 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0196 Lan-Chr15 2125381 2130176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0196 6 797 Glycosyltransferase AT3G43190 80.303 0.0 1344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0196 K00695 - gmx:100806761 1432.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0196 15 2125381 2130176 Lan14g0094 14 1260671 1266386 LSH
Lan12g0950 12 16367425 16372802 Lan15g0196 15 2125381 2130176 PCT
Lan1g1323 1 22933321 22938617 Lan15g0196 15 2125381 2130176 PCT
Lan1g0457 1 3773013 3780569 Lan15g0196 15 2125381 2130176 PCT
Lan15g0196 15 2125381 2130176 Lan12g0950 12 16367425 16372802 PCT
Lan15g0196 15 2125381 2130176 Lan1g1323 1 22933321 22938617 PCT
Lan15g0196 15 2125381 2130176 Lan1g0457 1 3773013 3780569 PCT