Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0950 ATGGCTACTGATCGTTTGACTCGAGTTCACAGTCTCCGCGAAAGGATTGATGAAACCCTCACTACTAGCAGGAATGAAATTCTGGCCCTTCTCTCAAGAATTGAAGGCAAGGGTAAGGGACTCCTGCAACACCATGAAATCATTGCTGAGTTTGAAGAAATCGCTGAGGAGAACAGACAGAAGCTAAGTGATGGTCCCTTTGGTGAAGTTCTGAGATCAACACAGGAAGCTATAGTTTTATCACCATGGGTTGCTTTGGCTGTTCGTCCTAGGCCTGGTGTTTGGGAGTACCTGAAAGTAAATGTGCATGCTCTTGTTGTTGAGGAGTTGCAAGCTGCCGAGTACCTGAAATTCAAGGAGGAACTTGTTGAAGGAAGTTCCAATGGTAACTTTGTGCTTGAATTGGACTTTGAACCGTTTAATGCATCTTTTCCTCGGCCAACTCTGAACAAATCAATTGGAAATGGTGTGCAATTCCTCAACCGCCACCTTTCTGCCAAACTCTTCCATGACAAGGAGAGCTTGCACCCTCTTCTGGAATTCCTCAGATCCCACAGTTACAACGGAAAGACATTGATGTTGAATGACAGAATTCAGACTCCAGATTCTCTTCAAAATGTGCTCCGGAAAGCTGAAGAGTATCTTGGCACACTTGCTCCTGAAACACCCTACTCAGAATTTGAATTCAAATTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGAGACACAGTCGAGCGTGTCCTTGAGATGATCCAACTTCTATTGGATCTTCTCGAGGCACCTGACCCTTGCACACTTGAGACATTCCTTGGAAGAATCCCTATGGTATTCAATGTTGTTATCCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTAGGATACCCGGACACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCTTTGGAGAATGAGATGCTGAAACGCATTAAGCAACAAGGCTTGGATATCGTCCCTCGCATTCTCATTATCACCCGTCTTCTCCCTGAGGCAGTAGGAACTACTTGTGGCCAACGTCTTGAGAAGGTATATGATACTGAACATTGCCACATTCTTCGAGTTCCCTTTAGAACTGAGAAGGGAATTGTACGCAAATGGATCTCCAGATTTGAAGTCTGGCCCTACCTAGAAACTTACACTGAGGATGTTGCCCATGAACTTGCCAAGGAGTTGCAAGGCAAGCCGGATCTGATTGTTGGGAACTATAGTGATGGAAACATTGTTGCCTCTTTGTTGGCACATAAATTAGGTGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATATCCTGAATCTGACATTTACTGGAAGAAATTTGACGAGAAATATCACTTCTCCTCCCAATTCACAGCTGATCTTTTTGCAATGAACCACACAGACTTCATTATCACTAGTACCTTCCAAGAGATTGCTGGAAACAAGGATACCGTTGGACAGTATGAGAGTCACACTGCCTTCACCCTTCCTGGACTCTACCGTGTTGTACATGGTATCGATGTTTTTGATCCAAAGTTCAATATTGTATCTCCTGGAGCTGACCAGACCATTTACTTCCCATACACTGAAACTAGCCGTCGGTTGACATCCTTCCACCCCGAGATTGAAGAGCTTCTTTACAGCTCAGTCGAGAATGAAGAGCACATATGTGTATTGAAGGACCGCAACAAGCCTATTATCTTCACCATGGCAAGGTTGGACCGTGTGAAGAACATTACAGGACTTGTGGAGTGGTATGGTAAGAATGCTCGCCTGCGTGAGTTGGTGAACCTTGTTGTCGTGGCCGGAGACAGGAGGAAGGAGTCCAAGGACCTGGAAGAGAAAGCTGAGATGAAGAAGATGTATGGCCTCATTGAGACATACAAGTTGAATGGACAATTCAGATGGATTTCATCTCAGATGAATAGAGTAAGGAATGGAGAGCTTTACCGTGTGATCTGTGACACAAAGGGTGCTTTTGTGCAGCCTGCTGTGTATGAAGCTTTTGGTCTGACTGTTGTTGAAGCCATGACTTGTGGTTTGCCAACTTTTGCTACATGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGATACCACATTGACCCTTATCATGGTGACCGTGCTGCTGATCTTCTTGTTGAATTCTTTGAGAAGTCTAAGGCAGATCCATCTCACTGGGACAAAATCTCCCATGGAGGCCTGCGCCGTATTGAAGAGAAGTATACATGGCAAATCTACTCTGAGAGGCTTCTGACACTCACCGGTGTCTACGGCTTCTGGAAACATGTGTCTAACCTTGACCACCGTGAAAGCCGCCGCTACCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTGTGGAGGAGTAA 2421 0.4552 MATDRLTRVHSLRERIDETLTTSRNEILALLSRIEGKGKGLLQHHEIIAEFEEIAEENRQKLSDGPFGEVLRSTQEAIVLSPWVALAVRPRPGVWEYLKVNVHALVVEELQAAEYLKFKEELVEGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRSHSYNGKTLMLNDRIQTPDSLQNVLRKAEEYLGTLAPETPYSEFEFKFQEIGLERGWGDTVERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLKRIKQQGLDIVPRILIITRLLPEAVGTTCGQRLEKVYDTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFDEKYHFSSQFTADLFAMNHTDFIITSTFQEIAGNKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDRAADLLVEFFEKSKADPSHWDKISHGGLRRIEEKYTWQIYSERLLTLTGVYGFWKHVSNLDHRESRRYLEMFYALKYRKLAESVPLAVEE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0950 806 Gene3D Glycogen Phosphorylase B; 280 796 - -
Lan12g0950 806 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Lan12g0950 806 PANTHER SUCROSE SYNTHASE 1 805 - -
Lan12g0950 806 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Lan12g0950 806 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Lan12g0950 806 Gene3D - 146 275 - -
Lan12g0950 806 Pfam Glycosyl transferases group 1 564 736 IPR001296 GO:0016757
Lan12g0950 806 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Lan12g0950 806 Gene3D Glycogen Phosphorylase B; 527 753 - -
Lan12g0950 806 Gene3D - 25 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0950 Lan-Chr12 16367425 16372802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0950 6 806 Glycosyltransferase AT3G43190 84.020 0.0 1412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0950 K00695 - gmx:547508 1514.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0950 12 16367425 16372802 Lan1g1323 1 22933321 22938617 LSH
Lan12g0950 12 16367425 16372802 Lan1g0457 1 3773013 3780569 LSH
Lan12g0950 12 16367425 16372802 Lan15g0196 15 2125381 2130176 PCT
Lan12g0950 12 16367425 16372802 Lan14g0094 14 1260671 1266386 PCT
Lan15g0196 15 2125381 2130176 Lan12g0950 12 16367425 16372802 PCT
Lan14g0094 14 1260671 1266386 Lan12g0950 12 16367425 16372802 PCT