Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1264 ATGGTGGTAAAGAAGCCAAGGATTGTGATAATTGGAGCAGGAATGGCTGGTCTCACTGCTGCAAACAAACTCCACACTATGACAGCCTCAAAAGACATGTTTGAGTTGTGTGTTGTAGAAGGTGGAACCAGGATTGGTGGCAGAATCAACACCTCAGATTTTGGTGGTGATAAGATAGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGTCCAATTCATGAAATTGCTCAACAAATCCATTCACTAGAGTCTGACCAGCCTTGGGAGTGCATGGATGGTAACTTGGATGAACCTACAACCATTGCTGAAGGTGGCTTCATCCTAAACCCTTCTATTGTTGACCCTATCACAAAGCTTTTCAATAGTCTCATGGATCATGCTCAAGGAAAGAATCTGATTGATTCAGTTTCAGATACTGAAAAAAGTGAACATTGCAGTTATTATCATAGTGTTGGTTCTTTTCTCAGACAAGGCCTTGATGCTTATTGGAGTTCAGGTTCATCAAAGGAGCAAGAGGAGGATCTCAAAGGGTATGGAAAATGGAGTAGGAAGTTGCTTGAAGAAGGAATCTTTGGAGTGCATGAGAATATTCAGAGGACATATACTTCTGCTGGTGACCTTTTGAGTCTAGATTATAGAGCAGAAAGTGAATACCAAATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTTGAGCATAATTGAGTCTTTAGCTTCTGTGCTTCCACCTGGAACAGTTCAGTTAGGTAGAAAAGTCACAAAGATTGAGTGGCAGCCAGAGAAAAATCATGAGCCAATGAATGTGGAAAATGGTTACTGTTCTAGGCCTGTAAAGCTACATTTCTATGATGGTTCAGTTATGTATGCTGATCATGTCATTGTCACAGTTTCACTTGGAGTACTAAAAGCTGCTATTCATCAAGATTCAGGTATGTTCTATCCTCCTCTACCCTTTTTCAAGGCTGAGGCAATTTCAAAGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTATGCAATTAAGTCCAACATATGAAAGAAAAGATGAACACTCTAGAGGGTTTTTCCCTTCCTTGCAAATGGTTTTTCATTCACCTCACTCTGAGATGAGGCACAAGGAAATACCCTGGTGGATGAGGAGAACAGCTACCCTTTGTCCCCTTCACAATAATTCTAGTGTCCTCTTATCTTGGTTTGCTGGTGAAGAAGCACTAGCACTTGAGTCACTCAAAGATGAAGAGATCATTCAAGGGGTTTCAACCACACTTTCAAGCTTTCTAACTCATGAACTTTACAATGTAAATGTGAGTTCTTTGGATAAGTCTCATGCATATGATGAAGTGAAAATCAGTAAGGTTTTGAAGACACAATGGGGAACAGATCCTTTATTTTTAGGCTCATACAGTTATGTGGCAATGGGATCAAGTGGTGATGATTTAGATATTATGGCAGAACCATTGCCAAAAGATGAATCTTTAGCTTCACCACCACTTCAAATTTTGTTTGCTGGAGAAGCAACTCATAGAACCCATTATTCTACAACTCATGGAGCTTATTTTAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAATATTATCACTGCCTTGAGATTTAA 1623 0.3993 MVVKKPRIVIIGAGMAGLTAANKLHTMTASKDMFELCVVEGGTRIGGRINTSDFGGDKIEMGATWIHGIGGSPIHEIAQQIHSLESDQPWECMDGNLDEPTTIAEGGFILNPSIVDPITKLFNSLMDHAQGKNLIDSVSDTEKSEHCSYYHSVGSFLRQGLDAYWSSGSSKEQEEDLKGYGKWSRKLLEEGIFGVHENIQRTYTSAGDLLSLDYRAESEYQMFPGEEITIAKGYLSIIESLASVLPPGTVQLGRKVTKIEWQPEKNHEPMNVENGYCSRPVKLHFYDGSVMYADHVIVTVSLGVLKAAIHQDSGMFYPPLPFFKAEAISKLGFGVVNKLFMQLSPTYERKDEHSRGFFPSLQMVFHSPHSEMRHKEIPWWMRRTATLCPLHNNSSVLLSWFAGEEALALESLKDEEIIQGVSTTLSSFLTHELYNVNVSSLDKSHAYDEVKISKVLKTQWGTDPLFLGSYSYVAMGSSGDDLDIMAEPLPKDESLASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQYYHCLEI* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1264 540 PANTHER FLAVIN MONOAMINE OXIDASE 1 539 - -
Lan1g1264 540 SUPERFAMILY FAD/NAD(P)-binding domain 3 535 IPR036188 -
Lan1g1264 540 Pfam Flavin containing amine oxidoreductase 15 532 IPR002937 GO:0016491
Lan1g1264 540 Gene3D - 94 478 - -
Lan1g1264 540 PANTHER POLYAMINE OXIDASE 5-RELATED 1 539 - -
Lan1g1264 540 Gene3D - 8 530 IPR036188 -
Lan1g1264 540 SUPERFAMILY FAD-linked reductases, C-terminal domain 332 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1264 Lan-Chr1 22458485 22460936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1264 K12259 - gmx:100809633 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1007 12 16756957 16759426 Lan1g1264 1 22458485 22460936 LSH
Lan1g1264 1 22458485 22460936 Lan1g0404 1 3239840 3243066 LSH
Lan1g1264 1 22458485 22460936 Lan15g0139 15 1452343 1454212 PCT
Lan1g1264 1 22458485 22460936 Lan14g0136 14 1716645 1718807 PCT
Lan15g0139 15 1452343 1454212 Lan1g1264 1 22458485 22460936 PCT
Lan14g0136 14 1716645 1718807 Lan1g1264 1 22458485 22460936 PCT