Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1007 ATGGTGGTCAAGAAACCAAAGATTGTGATAATTGGAGCAGGAATGGCAGGTCTTACTGCTGCTAACAAGCTCCATACTGTAACAGCCTCAAAAGACATGTTTGAGTTGTATGTTGTAGAAGGTGGAACAAGGCTTGGTGGTAGAATCAACACCTCAGAGTTTTGTGGTGATAAGATAGAGATGGGTGCTACATGGATCCATGGAATTGGAGGCAGCCCAATTCACAAAATTGCTCAACAAATTCATTCATTGGAGTCTGACCAGCCTTGGGAGTGCATGGATGGGAACTTAGATGAGCCTACTACTATTGCTGAAGGTGGCTTCATCCTAAACCCTTCAATTGTTGACCCTTTTACTAAGCTTTTCAATACTCTCATGGATCATGCTCAAGGGATGAAGCTGAGTGATTCAGTTTCAGACACTGAAAAAAGTGAACTTTACAGTTATTATCATAAGCTGGCTGCTAAAGCTTCCCAAGTCAGCAACAGTGTTGGTTCTTTTCTCAGACAAGGCCTTGATGGTTACTGGAGTTCAGGTTTAGAAAAGAAGCAAGAGGAGCTCAAAGGGTATGGGAAATGGAGCAAGAAGTTGCTTGAAGAAGGAATCTTTGCAATGCATGAGAATGCTCAGAGGACATATACATCCGCTGGTGACCTTTTGAGTCTAGATTATAGAGCAGAAAGTGAGTACCAAATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTTGAGCATAATTGAGTCTTTAGCTTCTGTGCTACCACCTGGAACAGTTCAGTTAGGTAGAAAAGTCACAAAGATTGAATGGCAGCCTGAGAGAAAAAACCATGAGCCAATGAATGTGGAAAATGGTTACTGTTCTAGGCCTGTGAAGCTACATTTCAATGATGGCTCAGTTATGTCAGCTGATCATGTCATTATCACAGTTTCACTAGGAGTACTAAAAGCTGCTATTCATGATGATTCAGGTATGTTCTATCCTCCTCTGCCATCTTTCAAGGCTGACGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGATATTTATGCAATTGAGTCCAACACATGAAAGAAAAAATGAACACTCTGAAGGGTGGTTCCCTTCCTTGCAAATGGTTTTTCATTCACCTCAATCTGAGATGAGGCACAAGAAAATACCCTGGTGGATGAGGAGAACTGCTACCCTTTGTCCCATATACAATAATTCCAGTGTCCTCCTATCTTGGTTTGCTGGTAAAGAAGCACTAGCACTTGAGTCACTCAAAGATGAAGAGATCATTCAAGGGGTTTCAACCACACTTTCAAGCTTTCTATCTCATAAATTTTCCAATGGTAATGTGAATGCTGAGGATAATTCTCAAGGATATGGAGTGAAATTCAGTAAAGTTTTGAAGACCAAATGGGGAACAGATCCTTTATTTTTAGGCTCATACAGTTATGTGGCAGTGGGATCAAGTGGAGATGATTTAGATGCAATGGCAGAACCATTGCCAAAAGATAAGCCTTTAGCTTCACCACCACTTCAAATTTTGTTTGCTGGGGAAGCAACTCACAGAACCCATTATTCTACAACTCATGGAGCTTACTTCAGTGGCCTTAGGGAAGCCAATAGGCTTCTTCAACATTATCACTGCCTTGGGATTTATAACTAG 1659 0.4105 MVVKKPKIVIIGAGMAGLTAANKLHTVTASKDMFELYVVEGGTRLGGRINTSEFCGDKIEMGATWIHGIGGSPIHKIAQQIHSLESDQPWECMDGNLDEPTTIAEGGFILNPSIVDPFTKLFNTLMDHAQGMKLSDSVSDTEKSELYSYYHKLAAKASQVSNSVGSFLRQGLDGYWSSGLEKKQEELKGYGKWSKKLLEEGIFAMHENAQRTYTSAGDLLSLDYRAESEYQMFPGEEITIAKGYLSIIESLASVLPPGTVQLGRKVTKIEWQPERKNHEPMNVENGYCSRPVKLHFNDGSVMSADHVIITVSLGVLKAAIHDDSGMFYPPLPSFKADAISRLGFGVVNKIFMQLSPTHERKNEHSEGWFPSLQMVFHSPQSEMRHKKIPWWMRRTATLCPIYNNSSVLLSWFAGKEALALESLKDEEIIQGVSTTLSSFLSHKFSNGNVNAEDNSQGYGVKFSKVLKTKWGTDPLFLGSYSYVAVGSSGDDLDAMAEPLPKDKPLASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCLGIYN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1007 552 PANTHER POLYAMINE OXIDASE 5-RELATED 1 549 - -
Lan12g1007 552 Gene3D - 268 487 - -
Lan12g1007 552 SUPERFAMILY FAD/NAD(P)-binding domain 3 545 IPR036188 -
Lan12g1007 552 SUPERFAMILY FAD-linked reductases, C-terminal domain 343 482 - -
Lan12g1007 552 Gene3D - 491 548 IPR036188 -
Lan12g1007 552 Gene3D - 2 147 IPR036188 -
Lan12g1007 552 Pfam Flavin containing amine oxidoreductase 15 542 IPR002937 GO:0016491
Lan12g1007 552 PANTHER FLAVIN MONOAMINE OXIDASE 1 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1007 Lan-Chr12 16756957 16759426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1007 K12259 - gmx:100783032 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1007 12 16756957 16759426 Lan1g1264 1 22458485 22460936 LSH
Lan12g1007 12 16756957 16759426 Lan1g0404 1 3239840 3243066 LSH
Lan12g1007 12 16756957 16759426 Lan15g0139 15 1452343 1454212 PCT
Lan12g1007 12 16756957 16759426 Lan14g0136 14 1716645 1718807 PCT
Lan15g0139 15 1452343 1454212 Lan12g1007 12 16756957 16759426 PCT
Lan14g0136 14 1716645 1718807 Lan12g1007 12 16756957 16759426 PCT