Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0139 ATGGTGGCCAAGAAACCAAAGATTGTGATCATTGGTGCAGGAATGGCAGGTCTAACAGCAGCCAACAAACTCTACACTGCTACATGTTCAAGGGACTTGTTTGATCTTTGTGTTGTTGAAGGTGGAACAAGAATTGGTGGTAGAATCAACACTTCACAATTTGGTGGTGATAGAATTGAGATGGGTGCTACTTGGATCCATGGAATTGGTGGCAGCCCAATTCACAAGATTGCTCAACAAAACCATTCACTTCATTCTGATAAACCTTGGGAGTGCATGGATGGAAACTCTTATGAGAATAGCACTATAACCATTGCTGAAGGTGGATACCAACTTGACCCTTCAGTTGTTGAGCCTGTTTCAATGGTTTTCAAGAACTTGATGAACCATTGTCAAGGGAAGGAGAAAGATACTAGTGCTTCAAATGGAGAACTTGGTGTTGGGTCATGGAACAATGTTAGTGTTGGTTCTTTTCTTAGAGAAGGACTTGGTGCTTATTTTGGTTCAGTGAAAGAGGAGGTTAAAGGGTATGGGAATTGGAGTAGGAAATTGATTGAAGAAGGTGTTTTTGCAATGCATGAGAATACTCAAAGGACTTATACATCAGCTGGTGATTTGTTGAGTCTAGATTATGGTGCTGAGAGTGAGTACATAATGTTTCCAGGTGAAGAAATCACTATTGCTAAAGGGTACTTGAGCATCATTGAATCCTTAGCTTCTGTGCTACCACTTGGGGTAGTTCAGTTAGGTAGGAAAGTTACAAAGATTGAGTGGCAGCCACAGAAAGATGAAGATTTTGAGATGAAAGTTTTGGTTAATGGTTGTTGTTTTAGGCCTGTGAAGTTGCATTTTTGTGATGGTTCTGTGATGCATGCTGATCATGTAATTATCACTGTTTCACTAGGGGTGCTAAAAGCTGCTATTAATAATGATGATGGTGATGATGATGGTGAAGATTCAGGTATGTTTTTCTGTCCTTCACTTCCACCTTTCAAGGCTGAAGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGTCAAAATACACAACATGAGAAACAGCACTTTCCATTCTTGCAAATGGTTTTTCATTCACCTCAATCTGAGGTTAGGAACAAGAAAATACCATGGTGGATGAGAAGAACAGCTACCCTTTTTCCTATTTATAAGAACTCTAGTGTCCTCTTATCTTGGTTTGCTGGTGAAGAAGCATTAGCACTTGAGTCACTCAATGATGAAGAGATCCTCAATGGAACTTCAGCAACATTTTCAACCTTTCTTTCACATTACAATTCTGATAAAAAGTCTCATCAAAATGAAGTCAAGTTTTGTAAAGTGTTGAAGAGTAAATGGGGTACTGACCCTTTGTTTTTAGGGTCATATAGTTATGTTGCTGTAGGATCAAGTGGTGATGATTTAGATATAATGGCTGAGCCATTGCCAAAAGATAACAATTTTCAGCCTCATGCTTCATTTCCACTGCAAATTTTGTTTGCAGGAGAAGCAACTCACAGAACTCATTATTCTACAACTCATGGTGCTTACTTCAGTGGTCTCAGAGAAGCTAATAGGCTTCTTCAACATTATCACTGTGTTGGGATTATTAACTAG 1629 0.3898 MVAKKPKIVIIGAGMAGLTAANKLYTATCSRDLFDLCVVEGGTRIGGRINTSQFGGDRIEMGATWIHGIGGSPIHKIAQQNHSLHSDKPWECMDGNSYENSTITIAEGGYQLDPSVVEPVSMVFKNLMNHCQGKEKDTSASNGELGVGSWNNVSVGSFLREGLGAYFGSVKEEVKGYGNWSRKLIEEGVFAMHENTQRTYTSAGDLLSLDYGAESEYIMFPGEEITIAKGYLSIIESLASVLPLGVVQLGRKVTKIEWQPQKDEDFEMKVLVNGCCFRPVKLHFCDGSVMHADHVIITVSLGVLKAAINNDDGDDDGEDSGMFFCPSLPPFKAEAISRLGFGVVNKLFMQLSQNTQHEKQHFPFLQMVFHSPQSEVRNKKIPWWMRRTATLFPIYKNSSVLLSWFAGEEALALESLNDEEILNGTSATFSTFLSHYNSDKKSHQNEVKFCKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDIMAEPLPKDNNFQPHASFPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIIN* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0139 542 Gene3D - 8 530 IPR036188 -
Lan15g0139 542 SUPERFAMILY FAD-linked reductases, C-terminal domain 340 469 - -
Lan15g0139 542 SUPERFAMILY FAD/NAD(P)-binding domain 1 535 IPR036188 -
Lan15g0139 542 Pfam Flavin containing amine oxidoreductase 15 532 IPR002937 GO:0016491
Lan15g0139 542 Gene3D - 94 475 - -
Lan15g0139 542 PANTHER FLAVIN MONOAMINE OXIDASE 1 539 - -
Lan15g0139 542 PANTHER POLYAMINE OXIDASE 5-RELATED 1 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0139 Lan-Chr15 1452343 1454212 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0139 K12259 - gmx:100783032 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0139 15 1452343 1454212 Lan14g0136 14 1716645 1718807 LSH
Lan12g1007 12 16756957 16759426 Lan15g0139 15 1452343 1454212 PCT
Lan1g1264 1 22458485 22460936 Lan15g0139 15 1452343 1454212 PCT
Lan1g0404 1 3239840 3243066 Lan15g0139 15 1452343 1454212 PCT
Lan15g0139 15 1452343 1454212 Lan12g1007 12 16756957 16759426 PCT
Lan15g0139 15 1452343 1454212 Lan1g1264 1 22458485 22460936 PCT
Lan15g0139 15 1452343 1454212 Lan1g0404 1 3239840 3243066 PCT