Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0404 ATGGTGGTCAAGAAACCAAGGATTGTGATTATTGGAGCAGGAATGGCAGGTCTCACTGCAGCCAACAAGCTCCACACTATGACAGCCTCAAAAGACATGTTTGAGTTATGTGTTGTAGAAGGTGGAACCAGAATTGGTGGCAGAATCAACACCTCAGAATTTGGTGGTGACAAGATAGAGATGGGTGCTACATGGATCCATGGAATTGGTGGCAGCCCAATTCACAAAATTGCTCAAAAGATCCATTCTTTGGAGTCTAACCAACCTTGGGAGTGCATGGATGGGAACTTAGATGAGCCTATAACCATTGCTGAAGGTGGGTTTATAATAAAACCTTCAATTGTTGACCCCATCACAATGCTTTTCAATACTCTCATGGATCATGCTCAAGGAAAGAAGCTCAGTGATTCAGCTTCAGACATGTCAACAACAAAAAGTGTTGGTTCTTTTCTTAGACAAGGCCTTGATGGTTACTGGAGTTCAGGTTCAGAAAAGAATCAAGAGGAGGAGCTCAAAGGGTATGGGAAATGGAACAGGAAATTACTTGAAGAAGGAATCTTTACAATGCATGAGAATACTCAGAGAACATATACATCTTCTGGTGATATTTTGACTCTAGATTATAGAGCAGAAAGTGAATATCAAATGTTTCCAGGAGAAGAAATCACAATTGCTAAAGGTTACTTGAGCATAATTGAGTCTTTAGCTTCTGTGCTACCACCTGGAACAGTTCAGTTAGGTAGAAAAGTTACAAGGATTGAATGGCAAGCTGAGAGAAATCATGAGCCAATGAATGTGGAAAATGGTTATTGCTCTAGGCCTGTGAAGTTACATTTCTGTGATGGTTCAGTTATGTGTGCTGATCATGTCATTGTCACAGTTTCACTTGGAGTACTAAAAGCTGCTATTCATGATGATTCAGGTATGTTCTATCCTCCTCTTCCTTCTTTCAAGGTTAAAGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTATGCAATTAAGTTCAACATATGAAAGAAAACATGAACAATCTAAAGGGTTGTTCCCTTCATTGCAAATGGTTTTTCATTCACCTAACTCTGAGATGAGGCACAAGAAAATACCCTGGTGGATGAGAAGAACAGCTTCACTTTCTCCCATATACAATAATTCCAGTGTCCTCTTATCTTGGTTTGCTGGTGAAGAAGCATTAGCACTTGAATCACTCAAAGATGAAGAGATCATTGATGGTGTTTCAACCACACTTTCAAGCTTTCTATCTGATAAACTTTGCAATGGGAATCTGAACTCTGAGAAGTCTAATGAATATGAAGTGAAATTCAATAAAGTGTTAAGGACAGATTGGGGAACAGATCCTTTATTTTTAGGGTCATACAGTTATGTTGCAGTGGGATCAAGTGGTGATGATTTAGATGCAATGGCTGAACCATTGCCAAAAGAAAAGGCTCTAGCTTCACCACCACTTCAAATTTTGTTTGCTGGGGAAGCAACTCACAGAACCCATTATTCTACAACTCATGGAGCTTATTTTAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAACATTATCATTGTCTTGGAATTTATAACTAG 1605 0.3913 MVVKKPRIVIIGAGMAGLTAANKLHTMTASKDMFELCVVEGGTRIGGRINTSEFGGDKIEMGATWIHGIGGSPIHKIAQKIHSLESNQPWECMDGNLDEPITIAEGGFIIKPSIVDPITMLFNTLMDHAQGKKLSDSASDMSTTKSVGSFLRQGLDGYWSSGSEKNQEEELKGYGKWNRKLLEEGIFTMHENTQRTYTSSGDILTLDYRAESEYQMFPGEEITIAKGYLSIIESLASVLPPGTVQLGRKVTRIEWQAERNHEPMNVENGYCSRPVKLHFCDGSVMCADHVIVTVSLGVLKAAIHDDSGMFYPPLPSFKVKAISRLGFGVVNKLFMQLSSTYERKHEQSKGLFPSLQMVFHSPNSEMRHKKIPWWMRRTASLSPIYNNSSVLLSWFAGEEALALESLKDEEIIDGVSTTLSSFLSDKLCNGNLNSEKSNEYEVKFNKVLRTDWGTDPLFLGSYSYVAVGSSGDDLDAMAEPLPKEKALASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCLGIYN* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0404 534 Pfam Flavin containing amine oxidoreductase 15 524 IPR002937 GO:0016491
Lan1g0404 534 PANTHER FLAVIN MONOAMINE OXIDASE 1 531 - -
Lan1g0404 534 SUPERFAMILY FAD/NAD(P)-binding domain 3 527 IPR036188 -
Lan1g0404 534 SUPERFAMILY FAD-linked reductases, C-terminal domain 326 464 - -
Lan1g0404 534 PANTHER POLYAMINE OXIDASE 5-RELATED 1 531 - -
Lan1g0404 534 Gene3D - 8 522 IPR036188 -
Lan1g0404 534 Gene3D - 92 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0404 Lan-Chr1 3239840 3243066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0404 K12259 - gmx:100809633 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0404 1 3239840 3243066 Lan1g0404 1 3239840 3243066 ECH
Lan12g1007 12 16756957 16759426 Lan1g0404 1 3239840 3243066 LSH
Lan1g1264 1 22458485 22460936 Lan1g0404 1 3239840 3243066 LSH
Lan1g0404 1 3239840 3243066 Lan15g0139 15 1452343 1454212 PCT
Lan1g0404 1 3239840 3243066 Lan14g0136 14 1716645 1718807 PCT
Lan15g0139 15 1452343 1454212 Lan1g0404 1 3239840 3243066 PCT
Lan14g0136 14 1716645 1718807 Lan1g0404 1 3239840 3243066 PCT