Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1249 ATGGATTCTCCATTGCCGAAATCATCTTTTGTTAACTCTGACACCGTTTCTGAGAGATTGAGTGATAAATTCGAAGATCTTAGAGGTTTGCAGTGGCGTATAAATCTTGGGGTTTTGCCTAATTCTCCTTCAAGTTCCATTGATGATCTTCGTCGTGCAACCGCTGATTCTAGAAGGAGTTATGCCAGTTTGAGAGGGCAACTACTGATTGATCCACAAAATTCAAAGGATGGAAGTACTTCACTTTCACCCAATCTTATTATGGACAACCCACTCTCACTAAATCCAGATAGTACATGGAGTCGCCATTTTCGCAATGCAGAGCTGGAGAGGATGGTTGATAAGGATTTAACACGTTTATACCCAGAACATGGCAGTTATTTCCAGACACCAGGATGCCAAGGCATTTTGAGACGAATTTTACTATTATGGTGTCTGAGACACCCAGAGTGTGGTTATAGACAAGGAATGCATGAACTACTTGCTCCACTGCTTTATGTTCTGCAAGTGGATGTTGAGCATCTTTCAGAAGTTCGGAAGCTTTATGAGGATCACTTCACCGACAGATTCGATGGCCTTTTTTGTCAAGAGAATGATCTTTCTTACAACTTCGATTTTAAAAAATCTCCAGACTTGATGGAGGATGAAATTGGCTCCCGTGGAAAGGCAATGAAAATCAAGAGTCTTGATGAGCTTGATCCTAAGATACGGACCATTGTATTGCTAAGTGATGCTTATGGGGCTGAAGGTGAACTTGGTATTGTTTTATCTGAGAAGTTCATGGAGCATGATGCTTACTGTATGTTTGATGCTTTAATGAATGGGGCTCGTGGTTCAGTTGCAATGGCTGATTTCTTCTCTTATTCTCCTGTGGCTGGGTCCCATACTGGCTTGCCTCCTGTAATTGAAGCTTCTACCGCATTGTATCATTTGTTGTCTCACGTGGATTCATCTCTTCATAGTTATCTTGTTGATCTCGGGGTTGAACCCCAGTACTTCGCTCTGCGCTGGTTGCGAGTTTTATTTGGACGGGAATTTTCACTTCACAACCTCTTGATCATCTGGGATGAAATCTTTTTATCAGATAATAGTGAAGTGGTAAAGCATGCTGAGGACAACACAGAGTCTGGTTTTAGCATCTTTCATTCATCTCGTGGAGCATTTATCTCAGCTATGGCTGTTGCAATGTTACTTAATTTAAGATCTTCGATATTCGCAACTGAAAATCCTACTACCTGTCTCCAGAGATTATTAAGCTTCCCTGAGAACACTAATATTAAGAAACTACTACGGAAGGCTAAATCCTTGCAAGCTCTTGCATTAACTTCTGATATTTCATGTTCAACACCTTCGTTTGCAGGGGGTCATAACCAAGGTAAATCAATTATTACAAGATCTCGGACCCTTCCATCTGAATCAGATTCTCCAAAAACTCCTATGAATTTGTTTCCTGATAGCTACTGGGAAGAACAGTGGAGACTTATCCACAAGGCTGAAGAACTTAAGAATGTTGAAGTAGAGAAAGAGGCTGCAACTCGGAAAACGGGACAGAATGAAAAGGTAAAGTTGAGTTTGAAAAGAGCAGAATCTCATCCATCTTTATCAAGTAAGGAACTAGGCTCTGAGGAAGATACAGAAAAACTGCCCTGTCATGAAATCGCATGCCAGCAGGATAATCTTTCTGTAACAGGTCAAGTGGAGCAACAAAGTTATGGCTCTGAAGGCTGCAATAGTTACTCTGCTGAGGATAGATGTCTAAGTGGAAACATTGGCAGTGAAGAAAACATGTCTATAACTTCTGACCCTGCTAGTCTTCCTAATGAGGCCGATGATCATGAAAACTACTCAGAGAAAAGTAGTGTCGGGTCTAACTTATTTCTTGATGAAATCAACGAAATTCTAAATATTAGCCCCCTTGATTCACCTCTTCCAATCTCTGATCGTCCTGAGTGCATATCTCAGACACCAGGGCGCAAAGATGATTCCACGGGAAATATGGTCACAAATGCTAAGGAGATAAAACTGAATAAATTTCACTGGCTTTGGAAGTTTGGGCAGAATAATGACCAAGTTATATCTGAGAAAGAAGAAGGTTCTTCTGAGGCTGCAAAACCTGCCAACAATAGTAAGAGTCATAGTAGTACAAAACCTTCTATAGCCGATGCACACTGTAGTTCAGTTGGTTGCAATGGAGATTCTGTAGACCAGGATGTGATGGGCACTTTGAGGAATATTGGTCACTCTATGCTTGAGCATATTCAGGTGATTGAGTCTGCTTTCCAACAAGACCAGAGCCCGGGAGCCTCACCGGATAACTTGTCTAAAAATGTTATGGTTGGCTCAGGGCAAGTTACTGCCATGACAGCATTAAAGGAGCTTCGCAAAATTAGCAATCTTTTATCTGAGATGTGA 2412 0.4129 MDSPLPKSSFVNSDTVSERLSDKFEDLRGLQWRINLGVLPNSPSSSIDDLRRATADSRRSYASLRGQLLIDPQNSKDGSTSLSPNLIMDNPLSLNPDSTWSRHFRNAELERMVDKDLTRLYPEHGSYFQTPGCQGILRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDVEHLSEVRKLYEDHFTDRFDGLFCQENDLSYNFDFKKSPDLMEDEIGSRGKAMKIKSLDELDPKIRTIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMNGARGSVAMADFFSYSPVAGSHTGLPPVIEASTALYHLLSHVDSSLHSYLVDLGVEPQYFALRWLRVLFGREFSLHNLLIIWDEIFLSDNSEVVKHAEDNTESGFSIFHSSRGAFISAMAVAMLLNLRSSIFATENPTTCLQRLLSFPENTNIKKLLRKAKSLQALALTSDISCSTPSFAGGHNQGKSIITRSRTLPSESDSPKTPMNLFPDSYWEEQWRLIHKAEELKNVEVEKEAATRKTGQNEKVKLSLKRAESHPSLSSKELGSEEDTEKLPCHEIACQQDNLSVTGQVEQQSYGSEGCNSYSAEDRCLSGNIGSEENMSITSDPASLPNEADDHENYSEKSSVGSNLFLDEINEILNISPLDSPLPISDRPECISQTPGRKDDSTGNMVTNAKEIKLNKFHWLWKFGQNNDQVISEKEEGSSEAAKPANNSKSHSSTKPSIADAHCSSVGCNGDSVDQDVMGTLRNIGHSMLEHIQVIESAFQQDQSPGASPDNLSKNVMVGSGQVTAMTALKELRKISNLLSEM* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1249 803 MobiDBLite consensus disorder prediction 693 720 - -
Lan1g1249 803 Gene3D - 301 444 - -
Lan1g1249 803 MobiDBLite consensus disorder prediction 702 720 - -
Lan1g1249 803 Pfam Rab-GTPase-TBC domain 261 363 IPR000195 -
Lan1g1249 803 Pfam Rab-GTPase-TBC domain 110 170 IPR000195 -
Lan1g1249 803 MobiDBLite consensus disorder prediction 590 617 - -
Lan1g1249 803 MobiDBLite consensus disorder prediction 506 545 - -
Lan1g1249 803 MobiDBLite consensus disorder prediction 452 482 - -
Lan1g1249 803 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 298 437 IPR035969 -
Lan1g1249 803 ProSiteProfiles TBC/rab GAP domain profile. 22 362 IPR000195 -
Lan1g1249 803 MobiDBLite consensus disorder prediction 590 604 - -
Lan1g1249 803 MobiDBLite consensus disorder prediction 452 480 - -
Lan1g1249 803 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 95 278 - -
Lan1g1249 803 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 22 733 - -
Lan1g1249 803 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 22 733 - -
Lan1g1249 803 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 26 286 IPR035969 -
Lan1g1249 803 SMART tbc_4 24 392 IPR000195 -
Lan1g1249 803 Coils Coil 494 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1249 Lan-Chr1 22346011 22350307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1249 K18469 - gmx:100816501 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1024 12 16908215 16913223 Lan1g1249 1 22346011 22350307 LSH
Lan1g1249 1 22346011 22350307 Lan15g0123 15 883676 888963 PCT
Lan1g1249 1 22346011 22350307 Lan14g0149 14 1843236 1848472 PCT
Lan15g0123 15 883676 888963 Lan1g1249 1 22346011 22350307 PCT
Lan14g0149 14 1843236 1848472 Lan1g1249 1 22346011 22350307 PCT