Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0149 ATGCCACCATCTTTTATGGATCCGTTGTCGTCGCCACCGTCACTTCCGCCGTTGAAGTCCGACTATGTTTGTCGGAGCTCGGAGAATCGGCGATTCGGTGATCTTAGAGGGCTACAGTGGCGCATAAATCTTGGGGTTTTGTCATCTTCAACTTCCATTGATGATCTTCGCCGAGTCACTGCTGATTCCAGAAGGAGGTATGCCAGATTAAGAAGGCACCTCTTGGTTGAACCGCATATTACGAAGGATGGAAGTCGTTCACCACCCGATCTTGTCATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCACTTTTTTCGCAGTGCGGAGCTAGAGAGAATGGTTGATCAGGATTTATCACGTTTATACCCAGAGCATGGCAGTTATTTCCAGACACCAGGATGCCAAGGCATGTTGAGACGAATTCTATTACTTTGGTGTCTCCGGCACCCAGAATGTGGTTATAGACAAGGAATGCACGAATTAATTGCTCCTCTGGTTTATGTTCTCCAAGTCGATCTGGAGCGTCTTTCCGAAGTTCGAAAGCTTTATGAAGATCTCTTCCTAGACAGATTTGATGGCCTTTTATGTCAAAAGAATGATCTTTGTTACAGCTTTGGTTTACGAAAATCTCAAGACTTGGTGGAGGATGAAACTGGCTCCCATGGAAATTCAATGAAAGTCAATCGTCTTGACGAGCTTGATCCTGACATACAGACAATTATATTGCTAAGTGATGCTTATGGTGTGGAAGGTGAACTGGGTATTGTTTTATCAGAGAAATTCATTGAACATGATGCTTACTGTATGTTTGATGCTTTAATGTCCCATGGTTCAGTTGCAACGACCGATTTCTTCTCTTCCTCTCCTATAGCCGGGTCCCTTAGTGGCCTCCCCCCTATGATTGAAGCTTCTAGTGCATTATATCATTTGTTGTCTCTTGTAGATTCATCTCTACATAGCCATCTTCTGGATCTTGGTGTTGAACCCCAGTACTTCTCTCTCCGATGGTTGCGAATTTTATTTGGACGAGAATTTTCACTTGACAACCTCTTGATCATCTGGGATGAGATCTTTGCATCAGATAATAATAGTAAAGTGGAAAAAAGTGCTGGTGATGGCATAGAGTGGAGGTTCAGGATCTTACATTCACCTCGTGGAGCATTTATCTCAGCTATGGCTGTAGCAATGTTACTCCATTTAAGATCTTCACTCCTTGCAGCTGAAAATCCGACAACCTGTCTCCAGAGATTATTAAACTTCCCCGAAGACATTAATATTGAAAAACTAGTAGAAAAGGCTAAATCCTTGCAGACTCTTGCATTAAGTGTTGATATTTTACCCTCTTCACCTTTGTTTCAAGAGTCTCATCACCAAGGTAAATCAGTGTTTCCAAGGTCTGTGACTCTTCCATCTGAACCCGTGTCTCCAAAAAACCCTCCGAATTTGTTACCTGATAGCTATTGGGAAGAAAAGTGGAGAGTTGTCCACAATACTGAAGAAAATAAGCAAGATGATGTACAAAAATCGATTCCAACTCAGAAAAAGGGATGGATAGAAAAGGTTAAGATCATTCTGAGAAGAACAGAATCTGATCCACCTTCATCAAGGATTCACAGTGGCAAAAAGTTACCTAAGGCACCTGTGAGGCGCAGTTTGGTAAAAGATCTTCGTAAGGCACTTGGCATGGAAGAAGCTACAGAACAAACGAAATGTCACGAAATCCTGTGCCAGCATGATAATCTTTCTGAAGCAGTTGAAGTGGAGCAACAAGGTGATGACCGTAAAGGCGATAGCAACTACTCATCTGATGAGAGATGTCCAAGTGGAAGTGCAGGCAGTGAGGAAGACTTTTCTGCATTCTCTGATCCAAGTAGTCCTCCAAATGGGGCCAATGATTATGAAATTACCTCAGCGAAAACTAGTGTTGCGTCTACCTTATCCATTGATGAATGCATTGAAACTAGTGTTGCGTCTAAATTATCCATTGATGAATGCATTGAAACTAGTGTTGCGTCTAAATTATCCATTGATGAAAGCAATGAAACTAGTGTTGCGTCTAACTTATCCATTGATGAATGCAATGAAACTTCACAAACCGTCCTTGATGTTCCACTTGTGCCAATCTCTTCACTGACCGAGAAATCAGGGTCCAATTGCAACAATGAAGGAAATTCAGCCACAGATCCTAAGGAAAGAAAACAGAATAAGTTCCAGTGGTTACTTAAGTTAGGACGGAATACTGTCGAGTTTATCTCTGAGAAAGTAGGTGCTGCTGCAGAGGCTGCAAAGTCGGCCAACAATTGTAGTAATAAAAGTAATACTCCACCACCGGAGTCTTCTACCGCAAATGCACATGATAGTTCTGTTAGTTGCAAAGGAGATTCTGTGGACCAGAATGTGATGGGCACTTTGAAGAACATTAGGCAGTCTATTCTTGACCATATTCAGGTAATTGAATCAGTTTTCCAGAAAGAGCAGGGCCAAGGAGCCTCAGTGGAGAATTTATCTAAAAATGTTCTTGTTGGCAAAGGCCAGGTTACTGCCATGTCAGCTCTCAAGGAGCTTAGGAAAATTAGCAATCTTTTGTCTGAGATGTGA 2610 0.4215 MPPSFMDPLSSPPSLPPLKSDYVCRSSENRRFGDLRGLQWRINLGVLSSSTSIDDLRRVTADSRRRYARLRRHLLVEPHITKDGSRSPPDLVMDNPLSQNPDSTWSHFFRSAELERMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPECGYRQGMHELIAPLVYVLQVDLERLSEVRKLYEDLFLDRFDGLLCQKNDLCYSFGLRKSQDLVEDETGSHGNSMKVNRLDELDPDIQTIILLSDAYGVEGELGIVLSEKFIEHDAYCMFDALMSHGSVATTDFFSSSPIAGSLSGLPPMIEASSALYHLLSLVDSSLHSHLLDLGVEPQYFSLRWLRILFGREFSLDNLLIIWDEIFASDNNSKVEKSAGDGIEWRFRILHSPRGAFISAMAVAMLLHLRSSLLAAENPTTCLQRLLNFPEDINIEKLVEKAKSLQTLALSVDILPSSPLFQESHHQGKSVFPRSVTLPSEPVSPKNPPNLLPDSYWEEKWRVVHNTEENKQDDVQKSIPTQKKGWIEKVKIILRRTESDPPSSRIHSGKKLPKAPVRRSLVKDLRKALGMEEATEQTKCHEILCQHDNLSEAVEVEQQGDDRKGDSNYSSDERCPSGSAGSEEDFSAFSDPSSPPNGANDYEITSAKTSVASTLSIDECIETSVASKLSIDECIETSVASKLSIDESNETSVASNLSIDECNETSQTVLDVPLVPISSLTEKSGSNCNNEGNSATDPKERKQNKFQWLLKLGRNTVEFISEKVGAAAEAAKSANNCSNKSNTPPPESSTANAHDSSVSCKGDSVDQNVMGTLKNIRQSILDHIQVIESVFQKEQGQGASVENLSKNVLVGKGQVTAMSALKELRKISNLLSEM* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0149 869 MobiDBLite consensus disorder prediction 467 486 - -
Lan14g0149 869 MobiDBLite consensus disorder prediction 766 798 - -
Lan14g0149 869 MobiDBLite consensus disorder prediction 715 736 - -
Lan14g0149 869 Gene3D - 302 447 - -
Lan14g0149 869 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 26 800 - -
Lan14g0149 869 MobiDBLite consensus disorder prediction 590 637 - -
Lan14g0149 869 MobiDBLite consensus disorder prediction 590 605 - -
Lan14g0149 869 MobiDBLite consensus disorder prediction 767 798 - -
Lan14g0149 869 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 34 325 IPR035969 -
Lan14g0149 869 SMART tbc_4 27 388 IPR000195 -
Lan14g0149 869 MobiDBLite consensus disorder prediction 533 554 - -
Lan14g0149 869 ProSiteProfiles TBC/rab GAP domain profile. 30 365 IPR000195 -
Lan14g0149 869 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 300 441 IPR035969 -
Lan14g0149 869 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 97 286 - -
Lan14g0149 869 MobiDBLite consensus disorder prediction 606 637 - -
Lan14g0149 869 MobiDBLite consensus disorder prediction 715 729 - -
Lan14g0149 869 Coils Coil 852 869 - -
Lan14g0149 869 Pfam Rab-GTPase-TBC domain 266 365 IPR000195 -
Lan14g0149 869 Pfam Rab-GTPase-TBC domain 115 174 IPR000195 -
Lan14g0149 869 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 26 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0149 Lan-Chr14 1843236 1848472 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0149 K18469 - gmx:100812967 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0123 15 883676 888963 Lan14g0149 14 1843236 1848472 LSH
Lan12g1024 12 16908215 16913223 Lan14g0149 14 1843236 1848472 PCT
Lan1g1249 1 22346011 22350307 Lan14g0149 14 1843236 1848472 PCT
Lan14g0149 14 1843236 1848472 Lan12g1024 12 16908215 16913223 PCT
Lan14g0149 14 1843236 1848472 Lan1g1249 1 22346011 22350307 PCT