Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0649 ATGGCAGGGAAGATCAATAACAAGGTGGAAGTTAACTTAGGGTGTGGTTTTGTGGAGAGAATTTTCCACTTCAAAAGCAATAGGCTGAAAAAATCATCTGTTCATTCACTACCTATGAAGGGTAGCAATAATGCACAACAGGCCAAAAGAGAAGAATCCAAGAAGCCTACAAAGGTTCCAAGAAACAACATTGCTGAGACTGTTCCAAATGATTCATCTCACACAGTTAAAGTGGATCAGAAACCTGAAAGAAAGAGCAACTATGGTAATCATGGAGCACTACCTTCTTCTGCATACCGAAACAACGGCCAAAAAATGAGGCCTTCGGATGCTGCTAGAAGCTCAACTTCATCATCTTCTGGTAACTCAAGCCACACAAAGGTTCAACAAAACCATGACTCAAGTGAAGAAAGTATGCAACACAAAGAACCTAATGGTAATTCTCTTCAACTTGCTAGGATAAGTACTAGTCACCAAAAAGAAAATGAAAGCAAATCACCAACCAAAGACTTAGGTACTTTGAAACTCACAGGAAATTTGATTATGAATAACAGCCCAAGAAATAGTGTTACCAAGAATAAAGAGTTGATTTCTATGTCCCCTAGTTATAGTAATGCTAACAAAGGTGTGATGGGGAATATCATGAGGAGGAACTATGATGAGGTTGCGCAGATTCGAAGTCCGAGGAATAGCATAGACCCCGAGGTTTTGAAGTCCATGGGAAATGAAGCATACAAGCAGAGAAGATTTGAAGAGGCTTTGTTTTTTTATGACCGAGCGATCGCTCTCGGTTCCAATAAGGCAATTTATCATTGCAATAAGAGTGCAGCTTTAATTGGCTTGGGAAGGTTTGTGCTAGCAATTGTTGAGTGTGAGGAAGCTATCAGGTTGGAACCTTCATATGGCAGAGCCTACAACCATTTAGCAACAATATATTTCAGATTGGGAGAAGCAGAAAAAGCACTGAATTGCAATCAAGTAACTACAGATTTTGATTCTGTACTCACTTTCCAAGCTCAGGCTCTTTCAAATCACCTTACCAAATGCATCGAAGCTCGGAAAGTTAATGAGTGGGAAGTTATACTAAAGGAAACACAGTCTGCAATAGCTCTAGGTGCTGATTCAGCTCCACAGATCTATGCTTTACAAACTGAAGCATTGCTGAAGCTCCTAAGACATCAAGAGGCATATGCTGCCTATGAGAAAATGCCAAAATTTGATCCTGACTGGTGTAACAAAATATTCGGCGCGGCTCATAGTGCTTACCTTTTGATGATAGGCTCACAAGTTTACTTGGCAGCTGGCAGATTCGAGGATGCCGAGACAGTATCTAAGCAAGCAGCGAAACTTGATCCAAGCAACAGCGAGGTGAATGTTGTGGTAAGGAGGGCCAGAGCAGTAACATCAGCCAGAATTAGTGGTAACTTACTCTTCAAGGCATCAAAATTCACAGAAGCGTGTGCGGTATACAACGAAGGATTAGAACACAATCCATACAACTCAGTTCTTCTATGCAACAGGGCAGCGTGTCGTTCTAAACTAGGCCAATTTGAGAAAGCAATTGAAGATTGCGACGCAGCCCTTAAAGTTCAGCCTAGTTATAGTAAGGCAAGGTTGCGAAGAGCAGATTGCAATGCTAAGTTGGAACGATGGGAAGCTGCTATTCAAGACTACGAAATGCTAATACGGGAAAAGCCAGGCGATGAGGAGGTAGCAAGGGCTCTATTTGAGGCACGGCTCCAACTTAAGATGCTGCGCGGTGAAGATATTAAGGACTTGAAATTTGGATCAAATTTGGTTTTCATCTCGAGTAATGATCGGTTCAGACATTATGTAACATCACCTGGTATGTCTGTGGTGCTCTTTTGCAACAAGACAACCGACAAGCAAGTATTGTTGGTGTTGGAGCAAACCTGCAAAAGATTTCCATCACTTAATTTCCTTAAGGTGGAGATTGAAGACCACCCTTATTTGGCCAAATCAGAAGGAGTGAGCTATATTCCATCCTTCAAAATATACAAGAATGGTTCAAAGGTCAAAGAAATTCAAGGAAACAACCACGAGTTGTTAGAAAGATCAGTTAAATTATATAGCAGTTGA 2100 0.4119 MAGKINNKVEVNLGCGFVERIFHFKSNRLKKSSVHSLPMKGSNNAQQAKREESKKPTKVPRNNIAETVPNDSSHTVKVDQKPERKSNYGNHGALPSSAYRNNGQKMRPSDAARSSTSSSSGNSSHTKVQQNHDSSEESMQHKEPNGNSLQLARISTSHQKENESKSPTKDLGTLKLTGNLIMNNSPRNSVTKNKELISMSPSYSNANKGVMGNIMRRNYDEVAQIRSPRNSIDPEVLKSMGNEAYKQRRFEEALFFYDRAIALGSNKAIYHCNKSAALIGLGRFVLAIVECEEAIRLEPSYGRAYNHLATIYFRLGEAEKALNCNQVTTDFDSVLTFQAQALSNHLTKCIEARKVNEWEVILKETQSAIALGADSAPQIYALQTEALLKLLRHQEAYAAYEKMPKFDPDWCNKIFGAAHSAYLLMIGSQVYLAAGRFEDAETVSKQAAKLDPSNSEVNVVVRRARAVTSARISGNLLFKASKFTEACAVYNEGLEHNPYNSVLLCNRAACRSKLGQFEKAIEDCDAALKVQPSYSKARLRRADCNAKLERWEAAIQDYEMLIREKPGDEEVARALFEARLQLKMLRGEDIKDLKFGSNLVFISSNDRFRHYVTSPGMSVVLFCNKTTDKQVLLVLEQTCKRFPSLNFLKVEIEDHPYLAKSEGVSYIPSFKIYKNGSKVKEIQGNNHELLERSVKLYSS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0649 699 SUPERFAMILY TPR-like 234 457 IPR011990 GO:0005515
Lan14g0649 699 ProSiteProfiles TPR repeat profile. 234 267 IPR019734 GO:0005515
Lan14g0649 699 Gene3D Glutaredoxin 594 698 - -
Lan14g0649 699 Coils Coil 541 561 - -
Lan14g0649 699 Pfam Tetratricopeptide repeat 503 534 IPR001440 GO:0005515
Lan14g0649 699 Pfam Thioredoxin 631 690 IPR013766 -
Lan14g0649 699 SUPERFAMILY TPR-like 473 583 IPR011990 GO:0005515
Lan14g0649 699 Gene3D Tetratricopeptide repeat domain 233 586 IPR011990 GO:0005515
Lan14g0649 699 ProSiteProfiles TPR repeat profile. 421 454 IPR019734 GO:0005515
Lan14g0649 699 CDD TRX_family 608 686 - -
Lan14g0649 699 MobiDBLite consensus disorder prediction 155 174 - -
Lan14g0649 699 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 698 IPR044534 -
Lan14g0649 699 MobiDBLite consensus disorder prediction 31 146 - -
Lan14g0649 699 SUPERFAMILY Thioredoxin-like 566 691 IPR036249 -
Lan14g0649 699 MobiDBLite consensus disorder prediction 31 46 - -
Lan14g0649 699 Pfam Tetratricopeptide repeat 430 500 - -
Lan14g0649 699 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 698 - -
Lan14g0649 699 MobiDBLite consensus disorder prediction 90 129 - -
Lan14g0649 699 SMART tpr_5 467 500 IPR019734 GO:0005515
Lan14g0649 699 SMART tpr_5 377 410 IPR019734 GO:0005515
Lan14g0649 699 SMART tpr_5 302 335 IPR019734 GO:0005515
Lan14g0649 699 SMART tpr_5 501 534 IPR019734 GO:0005515
Lan14g0649 699 SMART tpr_5 420 454 IPR019734 GO:0005515
Lan14g0649 699 SMART tpr_5 234 267 IPR019734 GO:0005515
Lan14g0649 699 SMART tpr_5 535 568 IPR019734 GO:0005515
Lan14g0649 699 SMART tpr_5 268 301 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0649 Lan-Chr14 13430476 13445586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0649 K09527 - gmx:100814381 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0649 14 13430476 13445586 Lan14g0649 14 13430476 13445586 ECH
Lan15g0848 15 17695087 17699169 Lan14g0649 14 13430476 13445586 LSH
Lan11g0471 11 3563955 3565705 Lan14g0649 14 13430476 13445586 PCT
Lan9g1116 9 18519604 18523045 Lan14g0649 14 13430476 13445586 PCT
Lan14g0649 14 13430476 13445586 Lan11g0471 11 3563955 3565705 PCT
Lan14g0649 14 13430476 13445586 Lan9g1116 9 18519604 18523045 PCT