Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0471 ATGGAGGTCAATGTAGTTTTAAGGAGGGCCAGAACAGTGACATCGGCTAGAATGAGTGGAAACTTACTCTTCAAGGCATCAAAATTCATGGAAGCATGTTCTGCATACAACGAAGGACTTGATCATGATCCTCACAATTCAGTTCTTCTATGCAACAGAGCAGCATGTCGGTCTAAGCTAGGCCAATATGAGAAAGCAGTTGAAGATTGTAATGTAGCTCTTATAGTTCAACCGAATTATAGCAAAGCAAGGTTTAGGAGAGCAGATTGCAATGCCAAGTTAGAAAGATGGGAAGCTGCAATTAAAGACTATGAAATGCTAATAAGAGAAAAACCAGGGGATGAGGAAGTGGCTAGGGCCTTATTTGAGGCCCAGCTCCAACTCAAGATGCTACGCGGTGAAGATATCAAAGACTTGAAATTTGGTTCAAATTTGGTTTTCATCTCAACCGCAGATCGGTTCAGACATTATGTAACCTTACCTGGGATGGCTGTGGTACTCTTTACCAACAAGGAAACCAACAAGCAAGTATTGCTGATGTTGGAGAAAACCAGCAAGAGATTCCCATCAGTTAATTTCCTTAAGGTGGAGATTGAAGACCATCCATTCTTAGCGAAATCAGAAGGTGTGAGCTCTGTCCCAGCTTTCAAAATATACAAGAATGGATCAAGGGTCGAAGAAATTTCAGGAAAAAACCATGAGTTGTTAGAAAGATCAGTTAAACTGTATAGCAGCTGA 738 0.4106 MEVNVVLRRARTVTSARMSGNLLFKASKFMEACSAYNEGLDHDPHNSVLLCNRAACRSKLGQYEKAVEDCNVALIVQPNYSKARFRRADCNAKLERWEAAIKDYEMLIREKPGDEEVARALFEAQLQLKMLRGEDIKDLKFGSNLVFISTADRFRHYVTLPGMAVVLFTNKETNKQVLLMLEKTSKRFPSVNFLKVEIEDHPFLAKSEGVSSVPAFKIYKNGSRVEEISGKNHELLERSVKLYSS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0471 245 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 2 244 - -
Lan11g0471 245 Coils Coil 87 107 - -
Lan11g0471 245 Pfam Thioredoxin 180 236 IPR013766 -
Lan11g0471 245 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 2 244 IPR044534 -
Lan11g0471 245 CDD TRX_family 175 230 - -
Lan11g0471 245 SMART tpr_5 81 114 IPR019734 GO:0005515
Lan11g0471 245 SMART tpr_5 13 46 IPR019734 GO:0005515
Lan11g0471 245 SMART tpr_5 47 80 IPR019734 GO:0005515
Lan11g0471 245 SUPERFAMILY TPR-like 18 129 IPR011990 GO:0005515
Lan11g0471 245 Gene3D Glutaredoxin 142 244 - -
Lan11g0471 245 Pfam Tetratricopeptide repeat 35 68 - -
Lan11g0471 245 Gene3D Tetratricopeptide repeat domain 2 132 IPR011990 GO:0005515
Lan11g0471 245 SUPERFAMILY Thioredoxin-like 116 237 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0471 Lan-Chr11 3563955 3565705 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0471 K09527 - lang:109359446 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0471 11 3563955 3565705 Lan9g1116 9 18519604 18523045 LSH
Lan11g0471 11 3563955 3565705 Lan15g0848 15 17695087 17699169 PCT
Lan11g0471 11 3563955 3565705 Lan14g0649 14 13430476 13445586 PCT
Lan15g0848 15 17695087 17699169 Lan11g0471 11 3563955 3565705 PCT
Lan14g0649 14 13430476 13445586 Lan11g0471 11 3563955 3565705 PCT