Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1596 ATGGAATATGAAAACCACTTCAGACAAGCCCAAAGACCAAAATATGATTGTCTTCTTTTTGATTTAGATGATACTTTGTATCCATTAAGCATTGGCTTTCATAAAGTATGCACCCAAAATATTAGAGATTATATGGTGGAGAAGCTTGGCATAGATAAAAGCAAAATTGATGAGTTGTCCAACCTTCTATACAGAAACTATGGAACAACTATGGCTGGTCTAAGGGGAATTGGATATGACTTTGACTATGATGATTATCACAGTTTTGTTCATGGAAGATTACCTTATGAGAACCTGAAACCAGACCCAGTTTTGAGGAACCTTTTGTTGAGTCTTCCATATAGGAAACTTATCTTCACAAATGCAGACAAGGTCCATGCAGTTAAGGCACTTAGCAGGCTTGGATTAGAGGACTGTTTTGAAGGAATCATATGCTTTGAGACTCTTAATCCCATAAACAATAACATTGAGTTTGTTGGTTCAAGCAAAACTAATAATCTAATCACAGGAAATGGTGCTAGCAGATCTCAAATTTTTGACATTATAGGCCATTTTGGTCAACCAAATCCTTGTGTAGATTTACCAAAGACACCAATTATATGCAAACCATCAGAATATGCTATTGAATTTGCTCTTAAGATAGCCAATCTTAATCCACAAAGAACATTGTTTTTTGAGGATAGTGTCCGAAACATACAAGCTGGAAAGCGTGTGGGACTTCACACTGTGCTGGTTGGTACATGTCAGAAAGTTAAAGGTGCAGATTATGCCTTAGAAAACATCCACAACATTAAAGAAGCAGTGCCTGAATTATGGGAAGGTGACATAAAATCAGAAATTGATTATACTGCAAAACTTGCTATGGAGACATTTGTGACTGCTTAG 885 0.3638 MEYENHFRQAQRPKYDCLLFDLDDTLYPLSIGFHKVCTQNIRDYMVEKLGIDKSKIDELSNLLYRNYGTTMAGLRGIGYDFDYDDYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAVKALSRLGLEDCFEGIICFETLNPINNNIEFVGSSKTNNLITGNGASRSQIFDIIGHFGQPNPCVDLPKTPIICKPSEYAIEFALKIANLNPQRTLFFEDSVRNIQAGKRVGLHTVLVGTCQKVKGADYALENIHNIKEAVPELWEGDIKSEIDYTAKLAMETFVTA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1596 294 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 200 245 IPR006439 -
Lal9g1596 294 SFLD C1.5.3: 5'-Nucleotidase Like 10 273 IPR010237 -
Lal9g1596 294 CDD HAD_5NT 17 247 IPR010237 -
Lal9g1596 294 SFLD Haloacid Dehalogenase 10 273 - -
Lal9g1596 294 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 294 - -
Lal9g1596 294 Pfam HAD-hyrolase-like 202 249 - -
Lal9g1596 294 Gene3D - 81 272 IPR023214 -
Lal9g1596 294 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 294 - -
Lal9g1596 294 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 245 IPR010237 -
Lal9g1596 294 SUPERFAMILY HAD-like 14 272 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1596 Lal-Chr9 18329038 18331827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1596 K07025 K18551 gmx:100796466 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1596 9 18329038 18331827 Lal9g1596 9 18329038 18331827 ECH
Lal2g1847 2 20790023 20793130 Lal9g1596 9 18329038 18331827 LSH
Lal9g1596 9 18329038 18331827 Lal1g2183 1 23832331 23835665 LSH
Lal9g1596 9 18329038 18331827 Lal14g0335 14 4403048 4407254 PCT
Lal14g0335 14 4403048 4407254 Lal9g1596 9 18329038 18331827 PCT