Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2183 TATAGTTCCTCCTCCCTCTCCACCTTGCTTTCTTCAATATCATTCTATTCTTTAAACTATTCTCCTTTCAACTTTTTTTCTTCATACTATTGGCTCTCTGGTTTTGTGCCTGAAATGGAGTATGAAAACCGCTTCAGACAGGTCCAGAGACCAAAATATGATTGTCTCCTTTTTGATTTAGATGATACTTTGTATCCATTAAGCACTGGCTTTCACAAAGTATGCACCAAAAATATTAGAGACTATATGGTTGAGAAGCTAGGCATAGAGAAAAACATAATTGATGAGTTATCCAACCTTCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGGAATTGGATATGACTTTGATTATGATGATTATCACAGTTTTGTACATGGAAGATTACCTTATGAGAATTTGAAACCAGACCCAGTTTTAAGGAACCTTTTGCTGAGCCTTCCCTATAGAAAACTTATCTTCACAAATGCAGACAAAGTCCATGCAGTTAAGGCACTTAGCAGGCTTGGATTAGAGGATTGTTTTGAAGGAATTATATGCTTTGAGACTCTTAATCCCATCAACAAAAACAACACTATTTATGATGATGACGACATTGATTTTATTGGTTCTACCAAAACCAATGATTCAACCACAGAAAATGGTGCTAGTAGATCCAAAATATTTGACATCATAAGGCATTTTGCTCAACCCAATCCTAGTGCAATTTTACCTAAGACACCAATTATATGCAAACCATCAGAAAATGCAATTGAATTTGCTCTAAAGATAGCCAATCTTAACCCACAAAGAACTCTATTCTTTGAAGATAGTGTCAGAAACATACAAGCTGGAAAGCGTGTGGGACTTCACACTGTTCAGGTTGGTACATCTCAGAAAGTTAAAGGTGCAGATTATGCCTTAGAAAGCATACATAACCTTAGAGAAGCAGTGCCAGAATTATGGGAAGCTGATATAAAATCAGATGTTACTTACACTGCCAAACTTGCTGTGGAAACATTTGTGACTGCTTAG 1023 0.3646 YSSSSLSTLLSSISFYSLNYSPFNFFSSYYWLSGFVPEMEYENRFRQVQRPKYDCLLFDLDDTLYPLSTGFHKVCTKNIRDYMVEKLGIEKNIIDELSNLLYKNYGTTMAGLRGIGYDFDYDDYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAVKALSRLGLEDCFEGIICFETLNPINKNNTIYDDDDIDFIGSTKTNDSTTENGASRSKIFDIIRHFAQPNPSAILPKTPIICKPSENAIEFALKIANLNPQRTLFFEDSVRNIQAGKRVGLHTVQVGTSQKVKGADYALESIHNLREAVPELWEADIKSDVTYTAKLAVETFVTA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2183 340 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 54 290 IPR010237 -
Lal1g2183 340 Pfam Haloacid dehalogenase-like hydrolase 248 291 IPR041492 -
Lal1g2183 340 SUPERFAMILY HAD-like 51 318 IPR036412 -
Lal1g2183 340 SFLD C1.5.3: 5'-Nucleotidase Like 49 320 IPR010237 -
Lal1g2183 340 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 39 340 - -
Lal1g2183 340 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 39 340 - -
Lal1g2183 340 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 246 291 IPR006439 -
Lal1g2183 340 SFLD Haloacid Dehalogenase 49 320 - -
Lal1g2183 340 Gene3D - 119 318 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2183 Lal-Chr1 23832331 23835665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2183 K07025 - gmx:100796466 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2183 1 23832331 23835665 Lal1g2183 1 23832331 23835665 ECH
Lal2g1847 2 20790023 20793130 Lal1g2183 1 23832331 23835665 LSH
Lal9g1596 9 18329038 18331827 Lal1g2183 1 23832331 23835665 LSH
Lal1g2183 1 23832331 23835665 Lal14g0335 14 4403048 4407254 PCT
Lal14g0335 14 4403048 4407254 Lal1g2183 1 23832331 23835665 PCT