Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1847 ATGGAGAATGAAAACCACTTCAGACAAGCCCAGAGACCAAAATATGATTGTCTTCTTTTTGATTTAGATGATACTTTGTATCCATTAAGCACTGGCTTTCATAAAGTATGCACCAAAAATATTAGAGAGTATATGGTGGAGAAACTCGGCATAGATAAAAACAAAATTGATGAATTGTCCAATCTTCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGGAATCGGATATAACTTTGACTATGATGATTATCATAGTTTTGTTCATGGAAGATTACCTTACGAGAACTTGAAACCAGATCCAGTTTTGAGGAACCTCTTACTAAACTTACCCTATAGGAAGCTTATCTTTACAAATGCAGACAAAGTTCATGCAATGAAAGCACTAAACAAGCTTGGATTAGAGGACTGTTTTGAAGGAATCATATGCTTTGAGACTCTTAATCCTATCAACAAGAACACTGTTTCTGATGATGATGATGACATTGAATTTATTGGTTGTAGCAAAACCAATGATCCAAACACATGCAATGGTGCTAGTAGATCCAAAATATTTGACATCATAGGGCATTTTTCTCAACCTAACCCTTGTGAAGTTTTGCCTAAGACACCAATTAGTTGCAAGCCTTCACAAAATGCCATTGAATTTGCTCTAAAGATAGCCAATCTTAACCCACAAAGAACAATGTTCTTTGAGGATAGTGTCAGAAACATACAAGCTGGAAAGTGTGTAGGACTTCACACTGTGCTGGTAGGTACATCTCAGAAAGTTAAAGGTGCAGATTATGCCTTAGAAAACATCCACAACCTTAGACAAGCAGTGCCTGAATTATGGGAAGCTGATATTATTTCAGATGTTTCTTACACTGCCAAACTTGTTGTGGAGACATTTGTGACTGCTTAG 909 0.3663 MENENHFRQAQRPKYDCLLFDLDDTLYPLSTGFHKVCTKNIREYMVEKLGIDKNKIDELSNLLYKNYGTTMAGLRGIGYNFDYDDYHSFVHGRLPYENLKPDPVLRNLLLNLPYRKLIFTNADKVHAMKALNKLGLEDCFEGIICFETLNPINKNTVSDDDDDIEFIGCSKTNDPNTCNGASRSKIFDIIGHFSQPNPCEVLPKTPISCKPSQNAIEFALKIANLNPQRTMFFEDSVRNIQAGKCVGLHTVLVGTSQKVKGADYALENIHNLRQAVPELWEADIISDVSYTAKLVVETFVTA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1847 302 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 205 253 IPR006439 -
Lal2g1847 302 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 253 IPR010237 -
Lal2g1847 302 SFLD Haloacid Dehalogenase 10 281 - -
Lal2g1847 302 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 302 - -
Lal2g1847 302 SFLD C1.5.3: 5'-Nucleotidase Like 10 281 IPR010237 -
Lal2g1847 302 SUPERFAMILY HAD-like 13 280 IPR036412 -
Lal2g1847 302 Pfam HAD-hyrolase-like 210 261 - -
Lal2g1847 302 Gene3D - 80 280 IPR023214 -
Lal2g1847 302 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1847 Lal-Chr2 20790023 20793130 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1847 K07025 - gmx:100796466 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1847 2 20790023 20793130 Lal2g1847 2 20790023 20793130 ECH
Lal2g1847 2 20790023 20793130 Lal9g1596 9 18329038 18331827 LSH
Lal2g1847 2 20790023 20793130 Lal1g2183 1 23832331 23835665 LSH
Lal2g1847 2 20790023 20793130 Lal14g0335 14 4403048 4407254 PCT
Lal14g0335 14 4403048 4407254 Lal2g1847 2 20790023 20793130 PCT