Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0335 ATGGATTTCAGACAACAGGTTCAGAGATCAAAATATGATTGTCTTCTTTTTGATTTAGATGATACTTTGTATCCCCTTAGTTCTGGTATTGCAAAAGCATGTCTCCAAAATATCAAAGACTACATGGTGGAGAAGCTTCTCATAGAACCACCCAAAATTGATGACTTGTCCAACCTCCTTTACAAGAACTACGGCACAACTATGGCTGGTCTAAGGGCAATTGGATATGACTTTGACTATGATGAATACCATAGTTTTGTTCATGGGAGGTTACCTTATCAAAAGTTGAAACCAGACCCAGTTCTAAGGAACCTGTTGCTGAGCCTCCCCTATAGGAAGCTTATCTTCACCAATGGAGATAAAGTACATGCAGCTAAGGCACTTAGCAGGCTTGGATTAGAAGATTGCTTTGATGGAATTATATGCTTTGAGACCCTTAATCCCATCCATAAGAGTACTGTTTCTGATGATGAAGATGACACTGAATTTGTGGGTTCCATGAGCATCAATCCAACCACATGCAATGGTGCTAGTAGCTCTCAAATCTTTGACATTATTAAGCATTTTGATCAACCCAATCCAAGTGTAGTGTTGCCAAAGACTCCAATTATTTGCAAACCATCAGAAAATGCTATTGATTTGGCTCTCAAAATAGCTAACCTTATCCCACAAAGAACTTTGTTCTTTGATGATAGTGTCCGTAACATACAAGCTGGAAAACGTGTGGGTCTACATACTGTGCTGGTTGGTACATCTCAAAGAGTTAAAGATGCAGATTATGCCTTAGAAAGTATCCACAACCTTAGGGAAGCAGTGCCTCAACTATGGGATGCTGACATAAAATCAGAAGTTACTTACCCTACTAAACTTTCTGTGGAAACATCAGTCACTGCTTAA 897 0.3924 MDFRQQVQRSKYDCLLFDLDDTLYPLSSGIAKACLQNIKDYMVEKLLIEPPKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYQKLKPDPVLRNLLLSLPYRKLIFTNGDKVHAAKALSRLGLEDCFDGIICFETLNPIHKSTVSDDEDDTEFVGSMSINPTTCNGASSSQIFDIIKHFDQPNPSVVLPKTPIICKPSENAIDLALKIANLIPQRTLFFDDSVRNIQAGKRVGLHTVLVGTSQRVKDADYALESIHNLREAVPQLWDADIKSEVTYPTKLSVETSVTA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0335 298 SUPERFAMILY HAD-like 11 274 IPR036412 -
Lal14g0335 298 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 3 298 - -
Lal14g0335 298 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 6 277 - -
Lal14g0335 298 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 13 249 IPR010237 -
Lal14g0335 298 Gene3D - 78 276 IPR023214 -
Lal14g0335 298 SFLD C1.5.3: 5'-Nucleotidase Like 6 277 IPR010237 -
Lal14g0335 298 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 3 298 - -
Lal14g0335 298 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 204 249 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0335 Lal-Chr14 4403048 4407254 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0335 K07025 - gmx:100796466 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0335 14 4403048 4407254 Lal14g0335 14 4403048 4407254 ECH
Lal2g1847 2 20790023 20793130 Lal14g0335 14 4403048 4407254 PCT
Lal9g1596 9 18329038 18331827 Lal14g0335 14 4403048 4407254 PCT
Lal1g2183 1 23832331 23835665 Lal14g0335 14 4403048 4407254 PCT
Lal14g0335 14 4403048 4407254 Lal2g1847 2 20790023 20793130 PCT
Lal14g0335 14 4403048 4407254 Lal9g1596 9 18329038 18331827 PCT
Lal14g0335 14 4403048 4407254 Lal1g2183 1 23832331 23835665 PCT