Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g1547 ATGGCAACACAACGTTCTCATGTTCCAAAATTTGGCAATTGGGAGAGTGAAGACAATGTTCCTTATACAGTTTTTTTTGACAAGGCCCGGAAAGATCGACCTGGTACAAAGATGATTAATCCAAATGACCCTGAGGAAACTTTAGATTCAGCTATTGATAACTCATCTTTGGCTAGAGTTAATTCAGAGGATCCACCTGCAAAGGGATCGGTGAAATTAACTGATGAGTTACAAAAGAGCAGGGAGGATACTGATCCTAAGCATTTTACTGATTCTCCAGCTCGTCAAAACAATGTAGGCAATAGGGTTGCCGGCCATGGAGTAGGTTCTGCTGATACCCGTAGAAGACCTTCGAGACAAAGTACTGGCTCTGAGTCCGGTGTTGAACGTTCACCCCTTCATCGTCAGGCTAGAGCTCCAGCCAAAGATAGTCCCTCTAGGGAAGGAAGGAGTTCATATGACAGCAGTCATGGTACACCAGGAAGGTCCCGATTAAGACCAGTTCATCGAGGAGATGAAAGTCCTGATAGAGGTGCTGCCGTTCCAAAGTTCGGGGACTGGGATGAGAATAACCCTGCAACAGCTGATGGCTATAGTCACATCTTCAACCAAGTGCTGAAGGAGAGACAGGATGCCACCGGAAATGCGCCAGGCACACCGAATGGAAGATCATCTGCTGTCAAGAACCAGCCTGCCAATGACAAAGGCCAGGTATACCTGCAAAACCCAGTTGCTGCTTTTGGTGGGGCAGAAAATGATTTCTTGGAAGCATGA 774 0.4677 MATQRSHVPKFGNWESEDNVPYTVFFDKARKDRPGTKMINPNDPEETLDSAIDNSSLARVNSEDPPAKGSVKLTDELQKSREDTDPKHFTDSPARQNNVGNRVAGHGVGSADTRRRPSRQSTGSESGVERSPLHRQARAPAKDSPSREGRSSYDSSHGTPGRSRLRPVHRGDESPDRGAAVPKFGDWDENNPATADGYSHIFNQVLKERQDATGNAPGTPNGRSSAVKNQPANDKGQVYLQNPVAAFGGAENDFLEA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g1547 257 MobiDBLite consensus disorder prediction 74 90 - -
Lal9g1547 257 MobiDBLite consensus disorder prediction 131 150 - -
Lal9g1547 257 MobiDBLite consensus disorder prediction 114 129 - -
Lal9g1547 257 MobiDBLite consensus disorder prediction 165 183 - -
Lal9g1547 257 MobiDBLite consensus disorder prediction 47 61 - -
Lal9g1547 257 MobiDBLite consensus disorder prediction 206 237 - -
Lal9g1547 257 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 3 238 - -
Lal9g1547 257 MobiDBLite consensus disorder prediction 27 240 - -
Lal9g1547 257 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 175 210 IPR008700 -
Lal9g1547 257 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 4 33 IPR008700 -
Lal9g1547 257 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 3 238 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g1547 Lal-Chr9 17817069 17820321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g1547 K13456 - gmx:100499220 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1759 2 19926323 19927075 Lal9g1547 9 17817069 17820321 LSH
Lal9g1547 9 17817069 17820321 Lal1g2147 1 23526858 23529082 LSH
Lal9g1547 9 17817069 17820321 Lal19g0084 19 646760 650880 PCT
Lal19g0084 19 646760 650880 Lal9g1547 9 17817069 17820321 PCT