Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2147 ATGGATGGTCTGATGGAAGTGATGAGGGTAAAAATGAATAACCTTTTTGTGATTCCATCTGAACTGATAGTTCTACTACGTATCTATGTAGAAATACCCTTTTTCCAGATTCTATCCAAGCAACGTTCTCAAGTTCCAAAATTTGGCAATTGGGAGGGTGAAGACAATGTTCCTTATACAGCTTATTTTGAGAAAGCCCGGAAAAATCGACCCAATACAAAGATGATTAATCCAAATGACCCCGAGGAAAATTTGGATTCAGTTATCGATAACTCATCGACTGCTGACCCAACCCCTTCAAAACCTAGAGTTGATTCACATACAGAGGATCCATCTGATCCTAAGTATTTCACTGATTCTCCAGCTCGGCAAAACAATGTAGGCAATCGGGGTGCCGGTGATTCTGCCCATCGCTATGGAGTAGGTTCTGCTGATAGCCGCAGAAGACCTTCAAGACAAAGTACTGGCTCTGACCAAAGCGTTGAACGCTCGCCTCTTCATCGGCAGTCTAGAGCCCCCGGCAAGGATAGTCCCTCTTGGGAAAGAAAAAGTTCATATGACAGCGGTCAAGCCACACCAGGAAGATCCCGATTAAGATCAGTTAATCGAGGAGATGAAAGTCCTGATAGAGGCGCTGCCGTTCCGAAGTTTGGGGAGTGGGATGAGAGTAACCCTGCAGCAGCTGACGGCTATACTCACATTTTCAACCAAGTGCGGGAGGAGAGACAGGTTGCTACCGGGAATGCGCCAGGCACACCTAATGGGAGATCATATGCTGTCAAGAACCAACCCGCTGACGACAAAGTCCAGGGTTGCTGTTTTTGGTGGGGCAGAAAATGA 840 0.4655 MDGLMEVMRVKMNNLFVIPSELIVLLRIYVEIPFFQILSKQRSQVPKFGNWEGEDNVPYTAYFEKARKNRPNTKMINPNDPEENLDSVIDNSSTADPTPSKPRVDSHTEDPSDPKYFTDSPARQNNVGNRGAGDSAHRYGVGSADSRRRPSRQSTGSDQSVERSPLHRQSRAPGKDSPSWERKSSYDSGQATPGRSRLRSVNRGDESPDRGAAVPKFGEWDESNPAAADGYTHIFNQVREERQVATGNAPGTPNGRSYAVKNQPADDKVQGCCFWWGRK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2147 279 MobiDBLite consensus disorder prediction 199 216 - -
Lal1g2147 279 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 40 275 IPR040387 -
Lal1g2147 279 MobiDBLite consensus disorder prediction 70 227 - -
Lal1g2147 279 MobiDBLite consensus disorder prediction 72 101 - -
Lal1g2147 279 MobiDBLite consensus disorder prediction 102 116 - -
Lal1g2147 279 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 208 243 IPR008700 -
Lal1g2147 279 MobiDBLite consensus disorder prediction 147 163 - -
Lal1g2147 279 MobiDBLite consensus disorder prediction 183 197 - -
Lal1g2147 279 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 40 275 - -
Lal1g2147 279 MobiDBLite consensus disorder prediction 164 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2147 Lal-Chr1 23526858 23529082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2147 K13456 - gmx:100499218 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1759 2 19926323 19927075 Lal1g2147 1 23526858 23529082 LSH
Lal9g1547 9 17817069 17820321 Lal1g2147 1 23526858 23529082 LSH
Lal1g2147 1 23526858 23529082 Lal19g0084 19 646760 650880 PCT
Lal19g0084 19 646760 650880 Lal1g2147 1 23526858 23529082 PCT