Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g1759 ATGTGCTCCTTATTATCTTTAAAACCCAGAGTTGATTCCGCCCATCGTAACGGAGGCCATGGAGTAGGTTCTGCTGATACCTGTAGAAGACCTTCAAGACAAAGTACTGTCTTCAAGTACAGCGTTGAACGTTCGCCTCTTCATCGCCAGACTAGAGCCCCAGGCAAGGATAGTCCCTCTTGGGAAGGAAATAGTTCATATGACAGCGGACATGGTACACCAGGGAGGTCCCGATTAAGACCCGTTAATCGAGGGGATGAAAGTCCTAATAGAGGTGCTGCTGTTCCAAAGTTTTGGGACTGGGATGAGAGTAATCCTGCCACAACCGATGGCTATACTCACATTTTCAATAAAGTGCGAGAGGAGAGACAGGTTGCTGCGCAAAATTCGCCAGGCACACCTAATGGTAGATGTTTGCGGTCAACAACCAATCTGCCAATGATAAAGGCCAGAGTTGCTGTTTTCTGGTGGGGCAGAAAATGA 483 0.4783 MCSLLSLKPRVDSAHRNGGHGVGSADTCRRPSRQSTVFKYSVERSPLHRQTRAPGKDSPSWEGNSSYDSGHGTPGRSRLRPVNRGDESPNRGAAVPKFWDWDESNPATTDGYTHIFNKVREERQVAAQNSPGTPNGRCLRSTTNLPMIKARVAVFWWGRK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g1759 160 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 27 138 IPR040387 -
Lal2g1759 160 MobiDBLite consensus disorder prediction 57 72 - -
Lal2g1759 160 MobiDBLite consensus disorder prediction 1 102 - -
Lal2g1759 160 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 27 138 - -
Lal2g1759 160 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 89 124 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g1759 Lal-Chr2 19926323 19927075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g1759 K13456 - gmx:100499219 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1759 2 19926323 19927075 Lal9g1547 9 17817069 17820321 LSH
Lal2g1759 2 19926323 19927075 Lal1g2147 1 23526858 23529082 LSH
Lal2g1759 2 19926323 19927075 Lal19g0084 19 646760 650880 PCT
Lal19g0084 19 646760 650880 Lal2g1759 2 19926323 19927075 PCT