Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0373 ATGGCTAAGAACTCATTCAAGATGGAACAACCACTCGAAAGGAGGCAGGCTGAAGCAGCTCGCATAAGAGAGAAGTATCCAGATAGAATTCCAGTAATTGTTGAAAGGGCAGAGAAGACTGATGTTCCTGAAATTGATAAGAAAAAGTATCTGGTTCCTGCTGATCTTACTGTTGGCCAGTTTGTGTATGTGGTGCGGAAGAGAATCAAACTGAGTCCTGAAAAGGCCATCTTCATTTTCGTAAAGAATATTTTACCGCCAACTGCGGCTATGATGTCGGCAATTTATGAGGAAAATAAGGATGAAGATGGATTCCTGTACATGACCTACAGTGGAGAGAACACATTTGGGATGATGATCTGA 363 0.4187 MAKNSFKMEQPLERRQAEAARIREKYPDRIPVIVERAEKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGMMI 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0373 120 CDD Ubl_ATG8 12 114 - -
Lal9g0373 120 Gene3D - 1 118 - -
Lal9g0373 120 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Lal9g0373 120 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Lal9g0373 120 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Lal9g0373 120 SUPERFAMILY Ubiquitin-like 4 117 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0373 Lal-Chr9 2471607 2474534 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0373 K08341 - gmx:100301895 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0373 9 2471607 2474534 Lal9g0373 9 2471607 2474534 ECH
Lal9g0373 9 2471607 2474534 Lal5g1459 5 17101456 17104611 ECH
Lal9g0373 9 2471607 2474534 Lal3g0278 3 1807349 1814845 ECH
Lal9g0373 9 2471607 2474534 Lal11g0439 11 3290839 3293479 ECH