Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0439 ATGTTGGAGAACAATCACCCTTCTAATTTCATCATGGCTAAAACCTCATTCAAGCTTCAACATCCTTTGGAAAGAAGACAGGCTGAGGCTTCCCGCATTAGAGAGAAGTATCCAGATAGAATTCCGGTGATTGTGGAGAAAGCTGAAAGAAGTGACATTCCAGACATTGATAAGAAGAAGTACCTTGTCCCAGCTGATTTGACTGTTGGTCAGTTTGTTTATGTTGTCCGGAAAAGAATTAAGCTCAGTGCAGAGAAGGCTATTTTTGTTTTCATCAACAACACTCTACCTCCAACTGCTGCATTGATGTCTGCTATTTATGAGGAAAATAAGGATGAAGATGGATTTCTTTACATGACTTACAGTGGAGAGAACACCTTTGGATCCAAGTAG 393 0.402 MLENNHPSNFIMAKTSFKLQHPLERRQAEASRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFINNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGSK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0439 130 CDD Ubl_ATG8 23 125 - -
Lal11g0439 130 Pfam Autophagy protein Atg8 ubiquitin like 25 128 IPR004241 -
Lal11g0439 130 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 11 128 IPR004241 -
Lal11g0439 130 SUPERFAMILY Ubiquitin-like 14 128 IPR029071 -
Lal11g0439 130 PANTHER AUTOPHAGY-RELATED PROTEIN 11 128 - -
Lal11g0439 130 Gene3D - 2 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0439 Lal-Chr11 3290839 3293479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0439 K08341 - gmx:100527884 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0439 11 3290839 3293479 Lal11g0439 11 3290839 3293479 ECH
Lal9g0373 9 2471607 2474534 Lal11g0439 11 3290839 3293479 ECH