Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1535 ATGAAGTTTCCTTTCATAACTCTCCTTCTTTCACAATCACATGAATATGACAAAGTAGTTAGTTTAGAAGAAGAAGAAGAAGAAAATATGTGGATTGTTTCAACAATTTGGAAGCTAATATTCAAATCAAAGAATGATGATTTGGAAAAGAGATTACATTATATTTCTAAACAAGAGACTCTTATTATGGACAGAATCAACCTAAGGTTCCTTTATAGAAGGAAGACCTCTCATCAACTTATTCTATTTTCTCTTTTATTTCAGGTAATTGCTGTAGGTTATGGTATAATGTCAAGTAGAACAATGGATATGAATTGGAAAATGAAGGCAATCAGGGTTTTGCCCATGTTTCTTTTGCCTGCTTTATCAACTGCTTCTTATTCAACATTTCTCACCTTCATAAGGATGTGTGATAGCAGGGACCAGAAAATTCTTGAAAGGCTTAGAGCTGAAAGGAAGGCAAAAATAGATGAACTGAAAGAGAAGACAAATTATTACACTACTCAACAACTCATTCAGAGATATGACACAGACCCATCAGCAAAGGCAGCTGCTGCATCTGTTCTGGCATCCAAGTTGGGTGCTGACTCAGGTTTAAAAGTGTACGTTGACGACGAATCAAAGCCCGGTGCTCCAACATCGAAGATTACCCGAAATCGTTCTGATCAACAATTAGTTGGTTCTGGTGTAAATGATCAAACTCAGACTTCTGAGCATCACCAATCTCAGAGTATAACAAAAAATAATGGAGGATGGATTGCTCGAGTTGCTGCATTGCTTGTTGGTGAGGATCCATCACAGTCATATGCACTCATATGTGGTAACTGCCATATGCATAATGGTCTTGCTCAGAAGGAGGATTTCACATTTATGAGTTACTACTGCCAACATTGTCATGCCCTAAACAAACCAAAGCAGTTAGGTGAGTATAGTATCTGTGGTCTTAATTCCCCAAATACAGATATTGGTGAGGTACCTAAAAAAGCTACTGCTTCTGAAGTTGAGAGCATAATCAAAAGCAACAGTCCCATAAATGATAACCCTGAAATTCAGGAACTATCTCAAAGGGCTAATTTGGTGGAAAAAGCTAGTTAG 1095 0.3744 MKFPFITLLLSQSHEYDKVVSLEEEEEENMWIVSTIWKLIFKSKNDDLEKRLHYISKQETLIMDRINLRFLYRRKTSHQLILFSLLFQVIAVGYGIMSSRTMDMNWKMKAIRVLPMFLLPALSTASYSTFLTFIRMCDSRDQKILERLRAERKAKIDELKEKTNYYTTQQLIQRYDTDPSAKAAAASVLASKLGADSGLKVYVDDESKPGAPTSKITRNRSDQQLVGSGVNDQTQTSEHHQSQSITKNNGGWIARVAALLVGEDPSQSYALICGNCHMHNGLAQKEDFTFMSYYCQHCHALNKPKQLGEYSICGLNSPNTDIGEVPKKATASEVESIIKSNSPINDNPEIQELSQRANLVEKAS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1535 364 MobiDBLite consensus disorder prediction 212 246 - -
Lal8g1535 364 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 252 302 IPR019273 -
Lal8g1535 364 MobiDBLite consensus disorder prediction 204 246 - -
Lal8g1535 364 MobiDBLite consensus disorder prediction 339 364 - -
Lal8g1535 364 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 22 215 - -
Lal8g1535 364 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 227 359 - -
Lal8g1535 364 MobiDBLite consensus disorder prediction 339 358 - -
Lal8g1535 364 Coils Coil 142 165 - -
Lal8g1535 364 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 22 215 IPR040115 GO:0071786
Lal8g1535 364 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 227 359 IPR040115 GO:0071786
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1535 Lal-Chr8 19666904 19676628 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1535 K23292 - gmx:100815496 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1535 8 19666904 19676628 Lal25g1085 25 14172540 14177834 LSH
Lal8g1535 8 19666904 19676628 Lal17g0265 17 1653224 1656671 PCT
Lal8g1535 8 19666904 19676628 Lal4g0248 4 1604637 1608006 PCT
Lal17g0265 17 1653224 1656671 Lal8g1535 8 19666904 19676628 PCT
Lal4g0248 4 1604637 1608006 Lal8g1535 8 19666904 19676628 PCT