Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0248 ATGGTTGATGATAAAGTGGTTGGAGAAGGTGAAAAGAAAGAGACAAGTCCTAATGGAAATGAAAAAAATAAGGGAAAGGGATTTTTTTCCAGAATCTGGAATGTTTTTAGGTTACAAGGCGATGATTTTGAGAAGAGGCTTCAATACATTTCTAAAGAAGAAGCTTCTGTTATTTCTAGAATGACCAGGAGATCAAAATCATGGAAACAGTTATCTAGGCATCTTATTATATTTTCTGTTATTTTTGAGGTCATTGCTGTAGGGTATGCTATAATGACAACAAGAACAATGGATATGGATTGGAAAATGAGGGCAATCCGAGTTTTGCCAATGTTTCTTTTGCCAGCATTGGCTTTCGCTGCATATTCAACATCCATCAGATTCACCAGAATGTGTGATCGCAAGGACCAAAGAATTCTTGAAAGGCTTCGAGGTGAAAGGCAAGCAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACATTACACAACAGCTCATTCAGAGATATGACCCAGACCCAGCTGCAAAGGCAGCAGCTGCAACTGTTTTGGCATCTAAGTTGGGTGCAGATTCAGGTTTGAAAGTGTATGTGGGAGATGAATCTAATTTAGGTGCTGCAATGGCAAAGAGCAATGACGCTGAACTTATGCAGTCCACCGGACTTCGAAATCGAAGAAATGTTCAATCTAGATCCACTAGTCCTGGGACAAGTACACCAAATTATTCTGATAAACAATTAGTTGGATCAAGGGGAACTGATCAAACAAGCATATCTGATCATAATCAGCTTGTAGTTGTGGAACACCACCAACCTCAAAGTTCAACCACTCAAGATGGAGGATGGATTGCACGACTTGCAGCATTGCTCGTTGGTGAGGATCCAACACAGTCTTATGCTCTCATATGCGGTAACTGTCACATGCATAATGGTCTGGCTAGGAAGGAGGATTTCCTATTTGTTACTTACTACTGTCCTCACTGTCAAGCTCTGAACAAACCAAAGCAATCAGATGATCGTATCTCTGGTAATACTTCCCCGAACATGGGGTCTCGTCCTCCAAAAACAGAAGCTGATCAAGCAGTTAAAGATGCTATCACTTCAGTGGTTGAGAGCATGATCACAAGCAAGAATAGCCATGAGATTGAGGAAGTATTAGAAAAGGCAAGTTTGGAAGAGAAAGCTAGTTAA 1191 0.4022 MVDDKVVGEGEKKETSPNGNEKNKGKGFFSRIWNVFRLQGDDFEKRLQYISKEEASVISRMTRRSKSWKQLSRHLIIFSVIFEVIAVGYAIMTTRTMDMDWKMRAIRVLPMFLLPALAFAAYSTSIRFTRMCDRKDQRILERLRGERQAKIDELKEKTNYYITQQLIQRYDPDPAAKAAAATVLASKLGADSGLKVYVGDESNLGAAMAKSNDAELMQSTGLRNRRNVQSRSTSPGTSTPNYSDKQLVGSRGTDQTSISDHNQLVVVEHHQPQSSTTQDGGWIARLAALLVGEDPTQSYALICGNCHMHNGLARKEDFLFVTYYCPHCQALNKPKQSDDRISGNTSPNMGSRPPKTEADQAVKDAITSVVESMITSKNSHEIEEVLEKASLEEKAS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0248 396 MobiDBLite consensus disorder prediction 333 360 - -
Lal4g0248 396 MobiDBLite consensus disorder prediction 219 257 - -
Lal4g0248 396 MobiDBLite consensus disorder prediction 1 20 - -
Lal4g0248 396 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 11 389 IPR040115 GO:0071786
Lal4g0248 396 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 11 389 - -
Lal4g0248 396 MobiDBLite consensus disorder prediction 1 23 - -
Lal4g0248 396 MobiDBLite consensus disorder prediction 335 353 - -
Lal4g0248 396 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 282 332 IPR019273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0248 Lal-Chr4 1604637 1608006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0248 K23292 - gmx:100797087 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0265 17 1653224 1656671 Lal4g0248 4 1604637 1608006 LSH
Lal8g1535 8 19666904 19676628 Lal4g0248 4 1604637 1608006 PCT
Lal25g1085 25 14172540 14177834 Lal4g0248 4 1604637 1608006 PCT
Lal4g0248 4 1604637 1608006 Lal8g1535 8 19666904 19676628 PCT
Lal4g0248 4 1604637 1608006 Lal25g1085 25 14172540 14177834 PCT