Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0458 ATGGGTATAATAGTATTATGGAGAAAAGAGATTGGAGATGAAGCAAAGAAGCAGCTATGGCTTGCAGGGCCAATGGTTTGTGTGTCTTTGTTTCAATACAGCTTACAAATGATATCTCTTATGTTTGTTGGCCATTTGGATGAGTTGCTTCTTGCTTCTGCTGCTTTGGCTACTTCATTTGTTAGTGTCACTGGTTTCAATGTATTGATGGGTATGTCAAGTGTGTTGGACACATTTTGTGGTCAATCATATGGAGCACAAGAATATGGGATGGTTGGCATACACAGAGAGAGAGCAATATTGGTTAGCATTATAGTTACTATGCCTGTTTCCTTTGTTTGGTTTTACTTAAAACCCATTCTTGTTTTTCTCCATCAAGACCATAATATATCAGCTCAAGCTGAATTATATGCCCGTTACTTAATCCCATGCCTTTCTGCCAATGCTATTCTTCGATGCATTATTAAATTCTTACAAACTCAGAGCATAGTTTTTCCAATGGTGCTAGCCACTGGAATTACTACCTTGCTACATTTACTTGTCTGTTGGGCTTTGGTTCTTAAATTTCAGCTTGGAATGAAGGGAGCTGCTATTGCTATTTGCATTTCAAATTGGTTTAACACTATAGTCTTAGCACTTTATATCAACTCCTCCTCTTCATGTAAAAGCACTTGGACTGGTTTCTCAAGGAAATCATTGCATAACATCCCTCAATTTCTCAAACTTGCTTTCCCTTCAACAGCTATGGTCTGCTTAGAAACTTGGATGTTTGAAATGATGGTACTTCTGTCTGGTGCTCTTCCTAATCCAAAATTGCAAACTTCAGTGCTTTCTATATGCCTTACAACATCTGGAATATTTTGGATGATACCATTTGGAATTAGTGCTGCTGGAAGTACAAGGATATCAAATGAGCTAGGAGCTGGTCGTCCAAAAGCTGCATATTTAGCTGTTAAAGTCAGCTTATTCATTGCATTCATAATGGCAATTATAGAATTTGTGCTCCTTATGTTGGTAAGGAACATTTGGGGCCGCGCTTTTACCGAAATACATGAAGTGGTCACCTATGTGGCTTCCATGACGCCAATTCTCGCAGCCTCTGCCTTCCTTGATTCAATTCAAACAGCATTCCAAGGTATTGCAAGAGGATGTGGTTGGCAAAAGCTTGGCGCGTTTGTCAATCTAGGATCATATTATCTTCTCGGCGTTCCTGTTGCGGTTGTGTTAGCTTTTGTCCTCCATATGAATGGGGAGGGGCTCTTTATAGGGATTGTATTAGCACTTACAGTGCAAGTGGTAATGTTTCTTCTTGTCACTGTATGCACCGATTGGGAGAAAGAAGTAAGTCATATTCTTATCTTCAACTCAGTTTTGTTGTCAACTTGGGATTTTAACAGGGATTTCTTTATTGTTCAGGCAAAAAGGGCAGCAATAAGAGTGCATGGCGGTGATCAAATTGTCACTCTTTGA 1470 0.3946 MGIIVLWRKEIGDEAKKQLWLAGPMVCVSLFQYSLQMISLMFVGHLDELLLASAALATSFVSVTGFNVLMGMSSVLDTFCGQSYGAQEYGMVGIHRERAILVSIIVTMPVSFVWFYLKPILVFLHQDHNISAQAELYARYLIPCLSANAILRCIIKFLQTQSIVFPMVLATGITTLLHLLVCWALVLKFQLGMKGAAIAICISNWFNTIVLALYINSSSSCKSTWTGFSRKSLHNIPQFLKLAFPSTAMVCLETWMFEMMVLLSGALPNPKLQTSVLSICLTTSGIFWMIPFGISAAGSTRISNELGAGRPKAAYLAVKVSLFIAFIMAIIEFVLLMLVRNIWGRAFTEIHEVVTYVASMTPILAASAFLDSIQTAFQGIARGCGWQKLGAFVNLGSYYLLGVPVAVVLAFVLHMNGEGLFIGIVLALTVQVVMFLLVTVCTDWEKEVSHILIFNSVLLSTWDFNRDFFIVQAKRAAIRVHGGDQIVTL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0458 489 CDD MATE_eukaryotic 14 450 IPR045069 GO:0042910|GO:1990961
Lal8g0458 489 PANTHER PROTEIN DETOXIFICATION 5 455 - -
Lal8g0458 489 Pfam MatE 245 408 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal8g0458 489 Pfam MatE 24 183 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal8g0458 489 TIGRFAM matE: MATE efflux family protein 24 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal8g0458 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 5 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0458 Lal-Chr8 3050541 3053536 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0458 K03327 - gmx:100813142 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0609 18 5247549 5254072 Lal8g0458 8 3050541 3053536 ECH
Lal8g0458 8 3050541 3053536 Lal8g0458 8 3050541 3053536 ECH
Lal8g0458 8 3050541 3053536 Lal25g0469 25 3239848 3243767 LSH
Lal8g0458 8 3050541 3053536 Lal23g0683 23 9524572 9528110 PCT